AT1G03940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.952 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : HXXXD-type acyl-transferase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G03495.1); Has 1873 Blast hits to 1858 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 18; Plants - 1853; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:1009542..1010951 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51928.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.12 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||
| Length | 469 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVAHLQPPKI IETCHISPPK GTVPSTTLPL TFFDAPWLSL PLADSLFFFS YQNSTESFLQ DFVPNLKHSL SITLQHFFPY AGKLIIPPRP DPPYLHYNDG 101: QDSLVFTVAE STETDFDQLK SDSPKDISVL HGVLPKLPPP HVSPEGIQMR PIMAMQVTIF PGAGICIGNS ATHVVADGVT FSHFMKYWMS LTKSSGKDPA 201: TVLLPSLPIH SCRNMIKDPG EVGAGHLERF WSQNSAKHSS HVTPENMVRA TFTLSRKQID NLKSWVTEQS ENQSPVSTFV VTLAFIWVSL IKTLVQDSET 301: KANEEDKDEV FHLMINVDCR NRLKYTQPIP QTYFGNCMAP GIVSVKKHDL LGEKCVLAAS DAITARIKDM LSSDLLKTAP RWGQGVRKWV MSHYPTSIAG 401: APKLGLYDMD FGLGKPCKME IVHIETGGSI AFSESRDGSN GVEIGIALEK KKMDVFDSIL QQGIKKFAT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)