AT1G03030.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); Has 3038 Blast hits to 3038 proteins in 1114 species: Archae - 9; Bacteria - 2199; Metazoa - 179; Fungi - 248; Plants - 85; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:701621..703568 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34058.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.58 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||
| Length | 301 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEVSSFSTVP RYCNSRSFVP ELSRFRGFKV HLWDQSLVPL HFSIRKRKNT PRYLISCSQK KDVTVVDGSC MDEIYDKLAE RLVPTAAAMF SPNLKRLVGL 101: AGPPGAGKST VANEVVRRVN KLWPQKAASF DAEVNPPDVA IVLPMDGFHL YRSQLDAMED PKEAHARRGA PWTFDPALLL NCLKKLKNEG SVYVPSFDHG 201: VGDPVEDDIF VSLQHKVVIV EGNYILLEEG SWKDISDMFD EKWFIDVNLD TAMQRVENRH ISTGKPPDVA KWRVDYNDRP NAELIIKSKT NADLLIRSMN 301: I |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)