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ATCG00710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : photosystem II reaction center protein H
Curator
Summary (TAIR10)
Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and QB, associated with the acceptor side of PSII.
Computational
Description (TAIR10)
photosystem II reaction center protein H (PSBH); FUNCTIONS IN: phosphate binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, oxygen evolving complex, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II phosphoprotein PsbH (InterPro:IPR001056).
Protein Annotations
BioCyc:MetaCyc:ATCG00710-MONOMERBioGrid:29936eggNOG:ENOG410J1Z3eggNOG:ENOG41123BFEMBL:AP000423EnsemblPlants:ATCG00710EnsemblPlants:ATCG00710.1
entrez:844730GeneID:844730Genevisible:P56780GO:GO:0009523GO:GO:0009535GO:GO:0015979GO:GO:0016021
GO:GO:0042301GO:GO:0050821Gramene:ATCG00710.1HAMAP:MF_00752hmmpanther:PTHR34469HOGENOM:HOG000246916InParanoid:P56780
IntAct:P56780InterPro:IPR001056iPTMnet:P56780KEGG:ath:ArthCp052KO:K02709MINT:MINT-8360514OMA:PLMAVFM
PaxDb:P56780Pfam:P56780Pfam:PF00737PRIDE:P56780PRO:PR:P56780ProDom:PD003584ProteinModelPortal:P56780
Proteomes:UP000006548RefSeq:NP_051087.1SMR:P56780STRING:3702.ATCG00710.1SUPFAM:0053713TAIR:ATCG00710tair10-symbols:PSBH
TMHMM:TMhelixUniProt:P56780
Coordinates (TAIR10) chrC:+:74485..74706
Molecular Weight (calculated) 7702.40 Da
IEP (calculated) 6.66
GRAVY (calculated) 0.35
Length 73 amino acids
Sequence (TAIR10)
(BLAST)
1: MATQTVEDSS RSGPRSTTVG KLLKPLNSEY GKVAPGWGTT PLMGVAMALF AVFLSIILEI YNSSVLLDGI SVN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)