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AT5G67280.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : receptor-like kinase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor-like kinase (RLK); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G37250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G67280-MONOMEReggNOG:ENOG410IEIIeggNOG:ENOG410YAQDEMBL:AB025614
EMBL:AK227163EMBL:BT001094EMBL:CP002688EMBL:FJ708818
EnsemblPlants:AT5G67280EnsemblPlants:AT5G67280.1entrez:836863Gene3D:3.80.10.10
GeneID:836863GO:GO:0004672GO:GO:0005524GO:GO:0016021
Gramene:AT5G67280.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF35InterPro:IPR000719
InterPro:IPR001611InterPro:IPR003591InterPro:IPR011009InterPro:IPR013210
InterPro:IPR032675KEGG:ath:AT5G67280OMA:RRPNIKEPfam:PF00069
Pfam:PF00560Pfam:PF08263Pfam:PF13855Pfscan:PS50011
PhylomeDB:Q9FGQ5PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_201529.1
SMART:SM00369SMR:Q9FGQ5STRING:3702.AT5G67280.1SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT5G67280tair10-symbols:RLKTMHMM:TMhelix
UniGene:At.7938UniProt:Q9FGQ5
Coordinates (TAIR10) chr5:-:26842430..26845126
Molecular Weight (calculated) 82067.50 Da
IEP (calculated) 6.34
GRAVY (calculated) -0.21
Length 751 amino acids
Sequence (TAIR10)
(BLAST)
001: MMTTVAADLH RYLFLITVFL FFLCDKTSLA LTTDGVLLLS FRYSIVDDPL YVFRSWRFDD ETPCSWRGVT CDASSRHVTV LSLPSSNLTG TLPSNLGSLN
101: SLQRLDLSNN SINGSFPVSL LNATELRFLD LSDNHISGAL PASFGALSNL QVLNLSDNSF VGELPNTLGW NRNLTEISLQ KNYLSGGIPG GFKSTEYLDL
201: SSNLIKGSLP SHFRGNRLRY FNASYNRISG EIPSGFADEI PEDATVDLSF NQLTGQIPGF RVLDNQESNS FSGNPGLCGS DHAKHPCRDG EATSPPPSPT
301: PNSPPALAAI PNTIGLTNHP ISSKTGPKSK WDHKPVLIIG IVVGDLAGLA ILGIVFFYIY QSRKRKTVTA TSKWSTSSTD SKVSKWYCLR KSVYVDGDCE
401: EEEEESETSE SESDEENPVG PNRRSGLDDQ EKKGTLVNLD SEKELEIETL LKASAYILGA TGSSIMYKAV LQDGTAVAVR RIAECGLDRF RDFEAQVRAV
501: AKLIHPNLVR IRGFYWGSDE KLVIYDFVPN GSLANARYRK VGSSPCHLPW DARLKIAKGI ARGLTYVHDK KYVHGNLKPS NILLGLDMEP KVADFGLEKL
601: LIGDMSYRTG GSAPIFGSKR STTSLEFGPS PSPSPSSVGL PYNAPESLRS IKPNSKWDVY SFGVILLELL TGKIVVVDEL GQVNGLVIDD GERAIRMADS
701: AIRAELEGKE EAVLACLKMG LACASPIPQR RPNIKEALQV LERFPVHSSQ Q
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)