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AT5G63610.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cyclin-dependent kinase E;1
Curator
Summary (TAIR10)
significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain.
Computational
Description (TAIR10)
cyclin-dependent kinase E;1 (CDKE;1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67580.2); Has 122304 Blast hits to 120929 proteins in 4501 species: Archae - 96; Bacteria - 13482; Metazoa - 46432; Fungi - 12531; Plants - 29277; Viruses - 477; Other Eukaryotes - 20009 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G63610-MONOMERBioGrid:21723EC:2.7.11.22EC:2.7.11.23
eggNOG:ENOG410XPPAeggNOG:KOG0666EMBL:AB005234EMBL:AJ439879
EMBL:AK228654EMBL:AY600243EMBL:BT005753EMBL:BT020376
EMBL:CP002688EnsemblPlants:AT5G63610EnsemblPlants:AT5G63610.1entrez:836481
GeneID:836481Genevisible:Q84TI6GO:GO:0004693GO:GO:0005524
GO:GO:0005634GO:GO:0007049GO:GO:0008353GO:GO:0051301
Gramene:AT5G63610.1hmmpanther:PTHR24056hmmpanther:PTHR24056:SF92HOGENOM:HOG000233024
InParanoid:Q84TI6IntAct:Q84TI6InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT5G63610KO:K02208
OMA:LANLPWWPaxDb:Q84TI6Pfam:PF00069Pfam:Q84TI6
Pfscan:PS50011PhylomeDB:Q84TI6PRIDE:Q84TI6PRO:PR:Q84TI6
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q84TI6
Proteomes:UP000006548RefSeq:NP_201166.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q84TI6STRING:3702.AT5G63610.1SUPFAM:SSF56112
TAIR:AT5G63610tair10-symbols:ATCDK8tair10-symbols:CDKE;1tair10-symbols:HEN3
UniGene:At.28990UniProt:Q84TI6
Coordinates (TAIR10) chr5:-:25463645..25465057
Molecular Weight (calculated) 52800.50 Da
IEP (calculated) 9.62
GRAVY (calculated) -0.45
Length 470 amino acids
Sequence (TAIR10)
(BLAST)
001: MGDGSSSRSN SSNSTSEKPE WLQQYNLVGK IGEGTYGLVF LARTKTPPKR PIAIKKFKQS KDGDGVSPTA IREIMLLREI SHENVVKLVN VHINFADMSL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)