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AT5G63400.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24727099 (2014): mitochondrion
  • PMID:23549413 (2013): plastid
  • PMID:22923678 (2012): mitochondrion
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): unclear
  • PMID:15276431 (2004): mitochondrion
  • PMID:14671022 (2004): mitochondrion
  • PMID:11743115 (2001): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : adenylate kinase 1
Curator
Summary (TAIR10)
encodes a protein similar to adenylate kinase.
Computational
Description (TAIR10)
adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 15080 Blast hits to 14911 proteins in 5099 species: Archae - 98; Bacteria - 9942; Metazoa - 1275; Fungi - 473; Plants - 468; Viruses - 0; Other Eukaryotes - 2824 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G63400-MONOMERBioCyc:ARA:GQT-2846-MONOMERBRENDA:2.7.4.3EC:2.7.4.3eggNOG:COG0563eggNOG:KOG3078EMBL:AB007649
EMBL:AF082882EMBL:AY039945EMBL:AY079340EMBL:AY085188EMBL:CP002688EnsemblPlants:AT5G63400EnsemblPlants:AT5G63400.1
entrez:836459ExpressionAtlas:O82514Gene3D:3.40.50.300GeneID:836459Genevisible:O82514GO:GO:0004017GO:GO:0005507
GO:GO:0005524GO:GO:0005739GO:GO:0005774GO:GO:0046686gramene_pathway:2.7.4.3gramene_pathway:DENOVOPURINE3-PWYHAMAP:MF_00235
hmmpanther:PTHR23359hmmpanther:PTHR23359:SF99HOGENOM:HOG000238772InterPro:IPR000850InterPro:IPR006259InterPro:IPR007862InterPro:IPR027417
iPTMnet:O82514KEGG:00230+2.7.4.3OMA:TEEYNIPPANTHER:PTHR23359PaxDb:O82514Pfam:O82514Pfam:PF00406
Pfam:PF05191PhylomeDB:O82514PRIDE:O82514PRINTS:PR00094PRO:PR:O82514PROSITE:PS00113ProteinModelPortal:O82514
Proteomes:UP000006548Reactome:R-ATH-499943RefSeq:NP_201145.1scanprosite:PS00113SMR:O82514STRING:3702.AT5G63400.1SUPFAM:SSF52540
TAIR:AT5G63400tair10-symbols:ADK1TIGRfam:TIGR01351TIGRFAMs:TIGR01351UniGene:At.23458unipathway:UPA00588UniProt:O82514
Coordinates (TAIR10) chr5:-:25393274..25394817
Molecular Weight (calculated) 26933.50 Da
IEP (calculated) 7.45
GRAVY (calculated) -0.39
Length 246 amino acids
Sequence (TAIR10)
(BLAST)
001: MATGGAAADL EDVQTVDLMS ELLRRLKCSQ KPDKRLIFIG PPGSGKGTQS PVVKDEYCLC HLSTGDMLRA AVASKTPLGV KAKEAMEKGE LVSDDLVVGI
101: IDEAMNKPKC QKGFILDGFP RTVTQAEKLD EMLKRRGTEI DKVLNFAIDD AILEERITGR WIHPSSGRSY HTKFAPPKTP GVDDITGEPL IQRKDDNADV
201: LKSRLAAFHS QTQPVIDYYA KKAVLTNIQA EKAPQEVTSE VKKALS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)