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AT5G52640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : heat shock protein 90.1
Curator
Summary (TAIR10)
Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.
Computational
Description (TAIR10)
heat shock protein 90.1 (HSP90.1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: defense response to bacterium, response to heat, response to arsenic; LOCATED IN: cytosol, cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0326eggNOG:KOG0019EMBL:AK220623EnsemblPlants:AT5G52640EnsemblPlants:AT5G52640.1entrez:835341ExpressionAtlas:Q570T4
Gene3D:3.30.565.10GO:GO:0005524GO:GO:0006457GO:GO:0006950hmmpanther:PTHR11528hmmpanther:PTHR11528:SF53InterPro:IPR001404
InterPro:IPR003594InterPro:IPR019805InterPro:IPR020575ncoils:CoilPANTHER:PTHR11528PaxDb:Q570T4Pfam:P27323
Pfam:PF00183Pfam:PF02518PRIDE:Q570T4PRINTS:PR00775PROSITE:PS00298ProteinModelPortal:Q570T4scanprosite:PS00298
SMART:SM00387STRING:3702.AT5G52640.1SUPFAM:0043579SUPFAM:SSF55874tair10-symbols:ATHS83tair10-symbols:AtHsp90-1tair10-symbols:ATHSP90.1
tair10-symbols:HSP81-1tair10-symbols:HSP81.1tair10-symbols:HSP83tair10-symbols:HSP90.1UniProt:P27323UniProt:Q570T4
Coordinates (TAIR10) chr5:+:21352542..21355147
Molecular Weight (calculated) 81184.40 Da
IEP (calculated) 4.67
GRAVY (calculated) -0.65
Length 705 amino acids
Sequence (TAIR10)
(BLAST)
001: MADVQMADAE TFAFQAEINQ LLSLIINTFY SNKEIFLREL ISNSSDALDK IRFESLTDKS KLDGQPELFI RLVPDKSNKT LSIIDSGIGM TKADLVNNLG
101: TIARSGTKEF MEALQAGADV SMIGQFGVGF YSAYLVAEKV VVTTKHNDDE QYVWESQAGG SFTVTRDVDG EPLGRGTKIT LFLKDDQLEY LEERRLKDLV
201: KKHSEFISYP IYLWTEKTTE KEISDDEDED EPKKENEGEV EEVDEEKEKD GKKKKKIKEV SHEWELINKQ KPIWLRKPEE ITKEEYAAFY KSLTNDWEDH
301: LAVKHFSVEG QLEFKAILFV PKRAPFDLFD TRKKLNNIKL YVRRVFIMDN CEELIPEYLS FVKGVVDSDD LPLNISRETL QQNKILKVIR KNLVKKCIEM
401: FNEIAENKED YTKFYEAFSK NLKLGIHEDS QNRGKIADLL RYHSTKSGDE MTSFKDYVTR MKEGQKDIFY ITGESKKAVE NSPFLERLKK RGYEVLYMVD
501: AIDEYAVGQL KEYDGKKLVS ATKEGLKLED ETEEEKKKRE EKKKSFENLC KTIKEILGDK VEKVVVSDRI VDSPCCLVTG EYGWTANMER IMKAQALRDS
601: SMSGYMSSKK TMEINPDNGI MEELRKRAEA DKNDKSVKDL VMLLYETALL TSGFSLDEPN TFAARIHRML KLGLSIDEDE NVEEDGDMPE LEEDAAEESK
701: MEEVD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)