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AT5G51820.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphoglucomutase
Curator
Summary (TAIR10)
Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.
Computational
Description (TAIR10)
phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT5G51820-MONOMERBRENDA:5.4.2.2EC:5.4.2.2eggNOG:COG0033eggNOG:KOG0625EMBL:AB010074EMBL:AF216580
EMBL:AJ242601EMBL:AY099708EMBL:AY128901EMBL:CP002688EnsemblPlants:AT5G51820EnsemblPlants:AT5G51820.1entrez:835257
Gene3D:3.30.310.50Gene3D:3.40.120.10GeneID:835257Genevisible:Q9SCY0GO:GO:0000287GO:GO:0004614GO:GO:0005829
GO:GO:0005975GO:GO:0005978GO:GO:0006006GO:GO:0009409GO:GO:0009507GO:GO:0009570GO:GO:0009590
GO:GO:0009941GO:GO:0010319GO:GO:0019252GO:GO:0019388GO:GO:0048046Gramene:AT5G51820.1gramene_pathway:5.4.2.2
gramene_pathway:PWY-5661gramene_pathway:PWY-621gramene_pathway:PWY-622gramene_pathway:PWY-842gramene_pathway:PWYQT-4437gramene_pathway:PWYQT-4466gramene_pathway:SUCSYN-PWY
gramene_plant_reactome:1119477gramene_plant_reactome:6874227HOGENOM:HOG000009550InParanoid:Q9SCY0InterPro:IPR005841InterPro:IPR005843InterPro:IPR005844
InterPro:IPR005845InterPro:IPR005846InterPro:IPR016055InterPro:IPR016066iPTMnet:Q9SCY0KEGG:00520+5.4.2.10KEGG:ath:AT5G51820
KO:K01835OMA:PAYSKGIPaxDb:Q9SCY0Pfam:PF00408Pfam:PF02878Pfam:PF02879Pfam:PF02880
Pfam:Q9SCY0PhylomeDB:Q9SCY0PIR:T52656PRIDE:Q9SCY0PRINTS:PR00509PRO:PR:Q9SCY0PROSITE:PS00710
ProteinModelPortal:Q9SCY0Proteomes:UP000006548Reactome:R-ATH-3322077Reactome:R-ATH-70221Reactome:R-ATH-70370RefSeq:NP_199995.1SABIO-RK:Q9SCY0
scanprosite:PS00710SMR:Q9SCY0STRING:3702.AT5G51820.1SUPFAM:SSF53738SUPFAM:SSF55957TAIR:AT5G51820tair10-symbols:ATPGMP
tair10-symbols:PGMtair10-symbols:PGM1tair10-symbols:STF1UniGene:At.1528UniProt:Q9SCY0
Coordinates (TAIR10) chr5:-:21063531..21067933
Molecular Weight (calculated) 67992.50 Da
IEP (calculated) 5.43
GRAVY (calculated) -0.17
Length 623 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSTYTRFDT VFLFSRFAGA KYSPLLPSPS FTLSTSGIHI RTKPNSRFHS IIASSSSSSV VAGTDSIEIK SLPTKPIEGQ KTGTSGLRKK VKVFMEDNYL
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)