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AT5G50370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:24727099 (2014): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:18385124 (2008): mitochondrion
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): unclear
  • PMID:15276431 (2004): mitochondrion
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Adenylate kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Adenylate kinase family protein; FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenylate kinase 1 (TAIR:AT5G63400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G50370-MONOMERBioGrid:20350DNASU:835104EC:2.7.4.3eggNOG:COG0563eggNOG:KOG3078EMBL:AB012248
EMBL:AK227882EMBL:AY086140EMBL:BT004811EMBL:CP002688EnsemblPlants:AT5G50370EnsemblPlants:AT5G50370.1entrez:835104
Gene3D:3.40.50.300GeneID:835104Genevisible:Q9FK35GO:GO:0004017GO:GO:0005507GO:GO:0005524GO:GO:0005739
GO:GO:0005774Gramene:AT5G50370.1gramene_pathway:2.7.4.3gramene_pathway:DENOVOPURINE3-PWYHAMAP:MF_00235hmmpanther:PTHR23359hmmpanther:PTHR23359:SF99
HOGENOM:HOG000238772IntAct:Q9FK35InterPro:IPR000850InterPro:IPR006259InterPro:IPR007862InterPro:IPR027417KEGG:00230+2.7.4.3
KEGG:ath:AT5G50370KO:K00939OMA:HEVFRPPPANTHER:PTHR23359PaxDb:Q9FK35Pfam:PF00406Pfam:PF05191
Pfam:Q9FK35PhylomeDB:Q9FK35PRIDE:Q9FK35PRINTS:PR00094PRO:PR:Q9FK35PROSITE:PS00113ProteinModelPortal:Q9FK35
Proteomes:UP000006548Reactome:R-ATH-499943RefSeq:NP_199848.1scanprosite:PS00113SMR:Q9FK35STRING:3702.AT5G50370.1SUPFAM:SSF52540
TAIR:AT5G50370TIGRfam:TIGR01351TIGRFAMs:TIGR01351UniGene:At.43295unipathway:UPA00588UniProt:Q9FK35
Coordinates (TAIR10) chr5:-:20509382..20510631
Molecular Weight (calculated) 27337.00 Da
IEP (calculated) 7.45
GRAVY (calculated) -0.38
Length 248 amino acids
Sequence (TAIR10)
(BLAST)
001: MATSSAASVD MEDIQTVDLM SELLRRMKCA SKPDKRLVFI GPPGSGKGTQ SPVIKDEFCL CHLSTGDMLR AAVAAKTPLG VKAKEAMDKG ELVSDDLVVG
101: IMDEAMNRPK CQKGFILDGF PRTVTQAEKL DEMLNRRGAQ IDKVLNFAID DSVLEERITG RWIHPSSGRS YHTKFAPPKV PGVDDLTGEP LIQRKDDNAD
201: VLRSRLDAFH KQTQPVIDYY AKKENLVNIP AEKAPEEVTK VVKKVVST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)