AT5G48230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : acetoacetyl-CoA thiolase 2 | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23880 Blast hits to 23851 proteins in 2352 species: Archae - 481; Bacteria - 15387; Metazoa - 998; Fungi - 680; Plants - 247; Viruses - 0; Other Eukaryotes - 6087 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:19552570..19555030 | ||||||||||||||||||||
| Molecular Weight (calculated) | 40879.40 Da | ||||||||||||||||||||
| IEP (calculated) | 5.85 | ||||||||||||||||||||
| GRAVY (calculated) | 0.20 | ||||||||||||||||||||
| Length | 398 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNVDESDVCI VGVARTPMGG FLGSLSSLPA TKLGSLAIAA ALKRANVDPA LVQEVVFGNV LSANLGQAPA RQAALGAGIP NSVICTTVNK VCASGMKAVM 101: IAAQSIQLGI NDVVVAGGME SMSNTPKYLA EARKGSRFGH DSLVDGMLKD GLWDVYNDCG MGSCAELCAE KFQITREQQD DYAVQSFERG IAAQEAGAFT 201: WEIVPVEVSG GRGRPSTIVD KDEGLGKFDA AKLRKLRPSF KENGGTVTAG NASSISDGAA ALVLVSGEKA LQLGLLVLAK IKGYGDAAQE PEFFTTAPAL 301: AIPKAIAHAG LESSQVDYYE INEAFAVVAL ANQKLLGIAP EKVNVNGGAV SLGHPLGCSG ARILITLLGI LKKRNGKYGV GGVCNGGGGA SALVLELL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)