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AT5G46290.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27177187 (2016): nucleus
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23851315 (2013): plastid
  • PMID:22923678 (2012): plastid
  • PMID:22215637 (2012): plasma membrane
  • PMID:21539947 (2011): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16207701 (2006): plastid
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 3-ketoacyl-acyl carrier protein synthase I
Curator
Summary (TAIR10)
3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,
Computational
Description (TAIR10)
3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G46290-MONOMERBioCyc:ARA:GQT-472-MONOMERBioCyc:ARA:GQT-473-MONOMERBioCyc:MetaCyc:AT5G46290-MONOMERBRENDA:2.3.1.41EC:2.3.1.41eggNOG:COG0304
eggNOG:KOG1394EMBL:AB010698EMBL:AY037261EMBL:AY087843EMBL:AY094005EMBL:AY123979EMBL:CP002688
EMBL:U24177EnsemblPlants:AT5G46290EnsemblPlants:AT5G46290.1entrez:834671ExpressionAtlas:P52410Gene3D:3.40.47.10GeneID:834671
Genevisible:P52410GO:GO:0004315GO:GO:0006633GO:GO:0009570gramene_pathway:2.3.1.41gramene_pathway:FASYN-ELONG-PWYgramene_pathway:PWY-5971
gramene_pathway:PWY-5989hmmpanther:PTHR11712hmmpanther:PTHR11712:SF226HOGENOM:HOG000060166InParanoid:P52410InterPro:IPR014030InterPro:IPR014031
InterPro:IPR016039InterPro:IPR017568InterPro:IPR018201InterPro:IPR020841iPTMnet:P52410KEGG:ath:AT5G46290KO:K09458
PaxDb:P52410Pfam:P52410Pfam:PF00109Pfam:PF02801PhylomeDB:P52410PRIDE:P52410PRO:PR:P52410
PROSITE:PS00606ProteinModelPortal:P52410Proteomes:UP000006548RefSeq:NP_001032018.1RefSeq:NP_199441.1scanprosite:PS00606SMART:SM00825
SMR:P52410STRING:3702.AT5G46290.3SUPFAM:SSF53901TAIR:AT5G46290tair10-symbols:KAS1tair10-symbols:KASITIGRfam:TIGR03150
TIGRFAMs:TIGR03150UniGene:At.9183UniProt:P52410
Coordinates (TAIR10) chr5:-:18774439..18776629
Molecular Weight (calculated) 50416.20 Da
IEP (calculated) 8.16
GRAVY (calculated) -0.16
Length 473 amino acids
Sequence (TAIR10)
(BLAST)
001: MQALQSSSLR ASPPNPLRLP SNRQSHQLIT NARPLRRQQR SFISASASTV SAPKRETDPK KRVVITGMGL VSVFGNDVDA YYEKLLSGES GISLIDRFDA
101: SKFPTRFGGQ IRGFSSEGYI DGKNERRLDD CLKYCIVAGK KALESANLGG DKLNTIDKRK AGVLVGTGMG GLTVFSEGVQ NLIEKGHRRI SPFFIPYAIT
201: NMGSALLAID LGLMGPNYSI STACATSNYC FYAAANHIRR GEADMMIAGG TEAAIIPIGL GGFVACRALS QRNDDPQTAS RPWDKARDGF VMGEGAGVLV
301: MESLEHAMKR GAPIVAEYLG GAVNCDAHHM TDPRADGLGV SSCIERCLED AGVSPEEVNY INAHATSTLA GDLAEINAIK KVFKSTSGIK INATKSMIGH
401: CLGAAGGLEA IATVKAINTG WLHPSINQFN PEQAVDFDTV PNEKKQHEVD VAISNSFGFG GHNSVVAFSA FKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)