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AT5G43600.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ureidoglycolate amidohydrolase
Curator
Summary (TAIR10)
Encodes a protein with ureidoglycolate amidohydrolase activity in vitro. It is 27% identical and 43% similar to the E. coli allantoate amidohydrolase (AAH), but, in vitro assays with purified protein and allantoate as a substrate do not show any increase in ammonium concentration, indicating that there this enzyme has no AAH activity.
Computational
Description (TAIR10)
ureidoglycolate amidohydrolase (UAH); FUNCTIONS IN: metallopeptidase activity, ureidoglycolate hydrolase activity; INVOLVED IN: proteolysis, allantoin catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Amidase, hydantoinase/carbamoylase (InterPro:IPR010158), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: allantoate amidohydrolase (TAIR:AT4G20070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G43600-MONOMERBioCyc:MetaCyc:AT5G43600-MONOMERBioGrid:19630EC:3.5.1.116
eggNOG:COG0624eggNOG:ENOG410IF7YEMBL:AB016875EMBL:AK230338
EMBL:AY074343EMBL:AY091387EMBL:CP002688EnsemblPlants:AT5G43600
EnsemblPlants:AT5G43600.1entrez:834380Gene3D:3.30.70.360GeneID:834380
Genevisible:Q8VXY9GO:GO:0000256GO:GO:0004848GO:GO:0005783
GO:GO:0006145GO:GO:0010136GO:GO:0046872Gramene:AT5G43600.1
hmmpanther:PTHR32494hmmpanther:PTHR32494:SF5HOGENOM:HOG000241291InParanoid:Q8VXY9
InterPro:IPR002933InterPro:IPR010158InterPro:IPR011650KEGG:ath:AT5G43600
KO:K18151OMA:MARVSPMPaxDb:Q8VXY9PDB:4PXB
PDB:4PXCPDB:4PXEPDBsum:4PXBPDBsum:4PXC
PDBsum:4PXEPfam:PF01546Pfam:Q8VXY9PhylomeDB:Q8VXY9
PRIDE:Q8VXY9PRO:PR:Q8VXY9ProteinModelPortal:Q8VXY9Proteomes:UP000006548
RefSeq:NP_199173.2SMR:Q8VXY9STRING:3702.AT5G43600.1SUPFAM:SSF53187
SUPFAM:SSF55031TAIR:AT5G43600tair10-symbols:ATAAH-2tair10-symbols:UAH
TIGRfam:TIGR01879TIGRFAMs:TIGR01879TMHMM:TMhelixUniGene:At.8617
UniPathway:UPA00395UniProt:Q8VXY9
Coordinates (TAIR10) chr5:+:17512651..17515280
Molecular Weight (calculated) 51489.90 Da
IEP (calculated) 5.36
GRAVY (calculated) -0.04
Length 476 amino acids
Sequence (TAIR10)
(BLAST)
001: MESLKRFLCS IALLLISLLL PSSLAQQQQH ESIRTMEDFS GYPIHEPGQF GSINLASSLS VDAPGLQNQI DELSSFSDAP SPSVTRVLYT DKDVSARRYV
101: KNLMALAGLT VREDAVGNIF GKWDGLEPNL PAVATGSHID AIPYSGKYDG VVGVLGAIEA INVLKRSGFK PKRSLEIILF TSEEPTRFGI SCLGSRLLAG
201: SKELAEALKT TVVDGQNVSF IEAARSAGYA EDKDDDLSSV FLKKGSYFAF LELHIEQGPI LEDEGLDIGV VTAIAAPASL KVEFEGNGGH AGAVLMPYRN
301: DAGLAAAELA LAVEKHVLES ESIDTVGTVG ILELHPGAIN SIPSKSHLEI DTRDIDEARR NTVIKKIQES ANTIAKKRKV KLSEFKIVNQ DPPALSDKLV
401: IKKMAEAATE LNLSHKMMIS RAYHDSLFMA RISPMGMIFI PCYKGYSHKP EEYSSPEDMA NGVKVLSLTL AKLSLD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)