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AT5G35360.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:26987276 (2016): plastid
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23851315 (2013): plastid
  • PMID:23444301 (2013): mitochondrion
  • PMID:23444301 (2013): mitochondrion mitochondrial matrix
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid envelope
  • PMID:16207701 (2006): plastid
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : acetyl Co-enzyme a carboxylase biotin carboxylase subunit
Curator
Summary (TAIR10)
Encodes biotin carboxylase subunit (CAC2).
Computational
Description (TAIR10)
acetyl Co-enzyme a carboxylase biotin carboxylase subunit (CAC2); FUNCTIONS IN: biotin carboxylase activity, acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, biotin carboxylase (InterPro:IPR004549), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (TAIR:AT1G03090.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G35360-MONOMERBioCyc:ARA:GQT-2157-MONOMERBioCyc:ARA:GQT-2739-MONOMERBioGrid:18751EC:6.3.4.14EC:6.4.1.2eggNOG:COG0439
eggNOG:ENOG410IU5CEMBL:AB025636EMBL:AF058826EMBL:AF360279EMBL:AY085968EMBL:AY142630EMBL:CP002688
EMBL:U90879EMBL:U91414EMBL:Y09061EnsemblPlants:AT5G35360EnsemblPlants:AT5G35360.1entrez:833497ExpressionAtlas:O04983
Gene3D:3.30.1490.20Gene3D:3.30.470.20Gene3D:3.40.50.20GeneID:833497Genevisible:O04983GO:GO:0003989GO:GO:0004075
GO:GO:0005524GO:GO:0006633GO:GO:0009507GO:GO:0046872GO:GO:2001295hmmpanther:PTHR18866HOGENOM:HOG000008988
InParanoid:O04983IntAct:O04983InterPro:IPR004549InterPro:IPR005479InterPro:IPR005481InterPro:IPR005482InterPro:IPR011054
InterPro:IPR011761InterPro:IPR011764InterPro:IPR013815InterPro:IPR013816InterPro:IPR016185PaxDb:O04983Pfam:O04983
Pfam:PF00289Pfam:PF02785Pfam:PF02786Pfscan:PS50975Pfscan:PS50979PhylomeDB:O04983PIR:T01180
PRIDE:O04983PRO:PR:O04983PROSITE:PS00866PROSITE:PS00867PROSITE:PS50975PROSITE:PS50979ProteinModelPortal:O04983
Proteomes:UP000006548RefSeq:NP_198386.1scanprosite:PS00866scanprosite:PS00867SMART:SM00878SMR:O04983STRING:3702.AT5G35360.3
SUPFAM:SSF51246SUPFAM:SSF52440SUPFAM:SSF56059TAIR:AT5G35360tair10-symbols:CAC2TIGRfam:TIGR00514TIGRFAMs:TIGR00514
UniGene:At.22848UniGene:At.70066UniPathway:UPA00655UniProt:O04983
Coordinates (TAIR10) chr5:+:13584300..13588268
Molecular Weight (calculated) 58390.60 Da
IEP (calculated) 7.28
GRAVY (calculated) -0.14
Length 537 amino acids
Sequence (TAIR10)
(BLAST)
001: MDASMITNSK SITSPPSLAL GKSGGGGVIR SSLCNLMMPS KVNFPRQRTQ TLKVSQKKLK RATSGGLGVT CSGGDKILVA NRGEIAVRVI RTAHEMGIPC
101: VAVYSTIDKD ALHVKLADEA VCIGEAPSNQ SYLVIPNVLS AAISRGCTML HPGYGFLSEN ALFVEMCRDH GINFIGPNPD SIRVMGDKAT ARETMKNAGV
201: PTVPGSDGLL QSTEEAVRVA NEIGFPVMIK ATAGGGGRGM RLAKEPGEFV KLLQQAKSEA AAAFGNDGCY LEKFVQNPRH IEFQVLADKF GNVVHFGERD
301: CSIQRRNQKL LEEAPSPALT AELRKAMGDA AVAAAASIGY IGVGTVEFLL DERGSFYFME MNTRIQVEHP VTEMIYSVDL IEEQIRVAMG EKLRYKQEDI
401: VLRGHSIECR INAEDPFKGF RPGPGRITSY LPSGGPFVRM DSHVYSDYVV PPSYDSLLGK LIVWAPTREK AIERMKRALN DTIITGVPTT INYHKLILDV
501: EDFKNGKVDT AFIVKHEEEL AEPQEIVAVK DLTNATV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)