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AT5G19330.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.740
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ARM repeat protein interacting with ABF2
Curator
Summary (TAIR10)
Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements.
Computational
Description (TAIR10)
ARM repeat protein interacting with ABF2 (ARIA); FUNCTIONS IN: protein binding; INVOLVED IN: response to salt stress, negative regulation of seed germination, response to abscisic acid stimulus; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Armadillo-like helical (InterPro:IPR011989), BTB/POZ fold (InterPro:IPR011333), Armadillo (InterPro:IPR000225), BTB/POZ-like (InterPro:IPR000210), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARMADILLO BTB protein 1 (TAIR:AT5G13060.1); Has 17070 Blast hits to 12388 proteins in 371 species: Archae - 10; Bacteria - 73; Metazoa - 10231; Fungi - 1020; Plants - 4279; Viruses - 94; Other Eukaryotes - 1363 (source: NCBI BLink).
Protein Annotations
BioGrid:17329eggNOG:ENOG410XRTNeggNOG:KOG0167EMBL:AF296837EMBL:AK220904EMBL:AK317640EMBL:AY058878
EMBL:CP002688EnsemblPlants:AT5G19330EnsemblPlants:AT5G19330.1entrez:832053ExpressionAtlas:B9DHT4Gene3D:1.25.10.10GeneID:832053
Genevisible:B9DHT4GO:GO:0005634GO:GO:0005886GO:GO:0009651GO:GO:0009737GO:GO:0010187GO:GO:0016567
hmmpanther:PTHR23315hmmpanther:PTHR23315:SF84HOGENOM:HOG000030229InParanoid:B9DHT4InterPro:IPR000210InterPro:IPR000225InterPro:IPR011333
InterPro:IPR011989InterPro:IPR016024iPTMnet:B9DHT4OMA:LLYMMRVPaxDb:B9DHT4Pfam:B9DHT4Pfam:PF00514
Pfam:PF00651Pfscan:PS50097Pfscan:PS50176PhylomeDB:B9DHT4PRIDE:B9DHT4PRO:PR:B9DHT4PROSITE:PS50097
PROSITE:PS50176ProteinModelPortal:B9DHT4Proteomes:UP000006548RefSeq:NP_850852.1SMART:SM00185SMART:SM00225SMR:B9DHT4
STRING:3702.AT5G19330.1SUPFAM:SSF48371SUPFAM:SSF54695TAIR:AT5G19330tair10-symbols:ARIAUniGene:At.20128UniPathway:UPA00143
UniProt:B9DHT4
Coordinates (TAIR10) chr5:-:6508095..6512701
Molecular Weight (calculated) 78190.90 Da
IEP (calculated) 6.09
GRAVY (calculated) -0.17
Length 710 amino acids
Sequence (TAIR10)
(BLAST)
001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)