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AT5G16390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : chloroplastic acetylcoenzyme A carboxylase 1
Curator
Summary (TAIR10)
Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.
Computational
Description (TAIR10)
chloroplastic acetylcoenzyme A carboxylase 1 (CAC1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin-binding site (InterPro:IPR001882), Single hybrid motif (InterPro:IPR011053), Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G16390-MONOMERBioGrid:16776DIP:DIP-58514NeggNOG:COG0511
eggNOG:ENOG410IXUZEMBL:AB005242EMBL:AF236873EMBL:AY054617
EMBL:AY072460EMBL:AY087857EMBL:CP002688EMBL:U23155
EMBL:U62029EnsemblPlants:AT5G16390EnsemblPlants:AT5G16390.1entrez:831500
ExpressionAtlas:Q42533GeneID:831500Genevisible:Q42533GO:GO:0003989
GO:GO:0006633GO:GO:0009317GO:GO:0009507GO:GO:0009536
GO:GO:0009570GO:GO:0009941hmmpanther:PTHR23151hmmpanther:PTHR23151:SF66
HOGENOM:HOG000008876InParanoid:Q42533InterPro:IPR000089InterPro:IPR001249
InterPro:IPR001882InterPro:IPR011053KEGG:ath:AT5G16390KO:K02160
MINT:MINT-8062366OMA:TSSHFPIPaxDb:Q42533Pfam:PF00364
Pfam:Q42533Pfscan:PS50968PhylomeDB:Q42533PRIDE:Q42533
PRINTS:PR01071PRO:PR:Q42533PROSITE:PS00188PROSITE:PS50968
ProteinModelPortal:Q42533Proteomes:UP000006548RefSeq:NP_197143.1scanprosite:PS00188
SMR:Q42533STRING:3702.AT5G16390.1SUPFAM:SSF51230TAIR:AT5G16390
tair10-symbols:BCCPtair10-symbols:BCCP1tair10-symbols:CAC1tair10-symbols:CAC1A
TIGRfam:TIGR00531TIGRFAMs:TIGR00531UniGene:At.22338UniPathway:UPA00094
UniProt:Q42533
Coordinates (TAIR10) chr5:-:5361098..5363020
Molecular Weight (calculated) 29614.30 Da
IEP (calculated) 9.57
GRAVY (calculated) -0.28
Length 280 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSSFSVTS PAAAASVYAV TQTSSHFPIQ NRSRRVSFRL SAKPKLRFLS KPSRSSYPVV KAQSNKVSTG ASSNAAKVDG PSSAEGKEKN SLKESSASSP
101: ELATEESISE FLTQVTTLVK LVDSRDIVEL QLKQLDCELV IRKKEALPQP QAPASYVMMQ QPNQPSYAQQ MAPPAAPAAA APAPSTPASL PPPSPPTPAK
201: SSLPTVKSPM AGTFYRSPAP GEPPFIKVGD KVQKGQVLCI VEAMKLMNEI ESDHTGTVVD IVAEDGKPVS LDTPLFVVQP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)