AT4G33740.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.999 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast hits to 73191 proteins in 2959 species: Archae - 732; Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants - 7078; Viruses - 1046; Other Eukaryotes - 46007 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:+:16187384..16188802 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52863.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 3.98 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.34 | ||||||||||||||||||||||||||||||||
| Length | 472 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKKTSTRSQR GSKGIKGKHV LQICVLLGVC IWLIYQVKYS HDKKKEFYEK DVEKSTVLLS EVEDGVVKLG RKDLLPKNYN QKENEKHVEE DEDEEEISHG 101: GEEKEKKSKV ENGNHEEEVE KDEEEEVAED DEEDKNKQGE EVAEEDEEEN KHEEDEIDEQ DQSKNAGDTD KDDETLEEEK ESGMSENDEK EKETNHADEI 201: DMTVDEAREE HYKADDASSA VSHESRILNT EKLKESSNET AQENNPNGAT SEVEIQKEPD LKLGEAENTN FVNKTTTDVK DGDSESSSSE TKSAVTESQS 301: ETVNGNSTVA LFEASEFVKN ETEIMRDRSQ GDGALPAGFS EPQPPVLELE KNRNESDPDI PISADITNKD FIQDESRNST SESSLLENIA GSNTTEVNEN 401: SRSEGDDDES GEKESSNIFS TELTEEADNT SGTSISQEEM DALTDPQTLP DIRIEGNEED EEEAIGAERK KL |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)