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AT4G12030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : bile acid transporter 5
Curator
Summary (TAIR10)
Required for the biosynthesis of methionine-derived glucosinolates. Involved in the transport of 2-keto acids between chloroplasts and the cytosol.
Computational
Description (TAIR10)
bile acid transporter 5 (BAT5); CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT4G22840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT4G12030EnsemblPlants:AT4G12030.1entrez:826811hmmpanther:PTHR10361
hmmpanther:PTHR10361:SF30Pfam:PF01758tair10-symbols:BASS5tair10-symbols:BAT5
TMHMM:TMhelix
Coordinates (TAIR10) chr4:+:7211716..7212713
Molecular Weight (calculated) 29212.80 Da
IEP (calculated) 9.13
GRAVY (calculated) 0.94
Length 273 amino acids
Sequence (TAIR10)
(BLAST)
001: MMFAVGINSN ERDFLEALKR PDAIFAGYIG QYLIKPLLGY IFGVIAVSLF NLPTSIGAGI MLVSCVSGAQ LSNYTTFLTD PSLAALSIVM TSISTATAVL
101: VTPMLSLLLI GKKLPVDVFG MISSILQVVI TPIAAGLLLN RLFPRLSNAI KPFLPALTVI DMSCCIGAPL ALNIDSILSP FGATILFLVI TFHLLAFVAG
201: YFFTGFFFSK APDVKALQRT ISYETGMQSS LLALALATKF FQDPLVGVPP AISTVVMSLM GVSLVTIWKN RKE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)