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AT4G04330.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperonin-like RbcX protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperonin-like RbcX protein; CONTAINS InterPro DOMAIN/s: Chaperonin-like RbcX (InterPro:IPR003435); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZM2eggNOG:ENOG4112182EMBL:AY045782EMBL:AY142573EMBL:CP002687EnsemblPlants:AT4G04330EnsemblPlants:AT4G04330.1
entrez:825753GeneID:825753GO:GO:0009409GO:GO:0009414GO:GO:0009534GO:GO:0009651GO:GO:0044183
GO:GO:0061077Gramene:AT4G04330.1hmmpanther:PTHR33791hmmpanther:PTHR33791:SF1HOGENOM:HOG000242810IntAct:Q94AU9InterPro:IPR003435
KEGG:ath:AT4G04330OMA:TYIAVRIPDB:4GR2PDBsum:4GR2Pfam:PF02341PhylomeDB:Q94AU9Proteomes:UP000006548
RefSeq:NP_567263.1SMR:Q94AU9STRING:3702.AT4G04330.1SUPFAM:SSF158615TAIR:AT4G04330UniGene:At.34032UniGene:At.63645
UniProt:Q94AU9
Coordinates (TAIR10) chr4:-:2116700..2118563
Molecular Weight (calculated) 20200.00 Da
IEP (calculated) 8.59
GRAVY (calculated) -0.58
Length 174 amino acids
Sequence (TAIR10)
(BLAST)
001: MESSSSLLHH SYLSYLNPKF GKRPLVSYPL MQSSRKCKQT RICSNKMYVP GFGEASPEAK AAKHLHDFFT YVAVRIVSAQ LESYNPEAYM ELREFLDTNS
101: VSDGDKFCAT LMRRSSRHMN LALRILEVRS AYCKNDFEWD NMKRLAFKNV DDSNTRLMRE YVLETSHVET DSDK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)