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AT3G62550.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.579
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Adenine nucleotide alpha hydrolases-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT1G09740.1); Has 3064 Blast hits to 3005 proteins in 732 species: Archae - 271; Bacteria - 1876; Metazoa - 108; Fungi - 22; Plants - 723; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZWYeggNOG:ENOG410ZR4YEMBL:AY035146EMBL:AY059079EMBL:CP002686EnsemblPlants:AT3G62550EnsemblPlants:AT3G62550.1
entrez:825429Gene3D:3.40.50.620GeneID:825429GO:GO:0005524GO:GO:0005773GO:GO:0006950Gramene:AT3G62550.1
hmmpanther:PTHR31964hmmpanther:PTHR31964:SF52HOGENOM:HOG000238898InterPro:IPR006015InterPro:IPR006016InterPro:IPR014729KEGG:ath:AT3G62550
OMA:LVMGTHDPfam:PF00582PhylomeDB:Q93W91PRINTS:PR01438Proteomes:UP000006548RefSeq:NP_191814.1SMR:Q93W91
STRING:3702.AT3G62550.1SUPFAM:SSF52402TAIR:AT3G62550UniGene:At.20280UniProt:Q93W91
Coordinates (TAIR10) chr3:+:23136194..23137074
Molecular Weight (calculated) 18266.00 Da
IEP (calculated) 5.07
GRAVY (calculated) -0.18
Length 162 amino acids
Sequence (TAIR10)
(BLAST)
001: MEETKERKIV VAVDESEESM EALSWSLDNL FPYGSNNTLI LLYVKPPLPV YSSLDAAGFI VTGDPVAALK KYEYELVESV MARSRTVYQD YESDINIERR
101: VGRGDAKEVI CNAVQKLRVD MLVMGTHDYG FFKRALLGSV SEYCAKRVKC PVVIVKKQAQ DN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)