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AT3G61770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acid phosphatase/vanadium-dependent haloperoxidase-related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acid phosphatase/vanadium-dependent haloperoxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1098 Blast hits to 1098 proteins in 404 species: Archae - 0; Bacteria - 724; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1963eggNOG:ENOG410IFGNEMBL:AY080661EMBL:AY086903
EMBL:AY123039EMBL:CP002686EnsemblPlants:AT3G61770EnsemblPlants:AT3G61770.1
entrez:825350GeneID:825350GO:GO:0004601GO:GO:0016021
Gramene:AT3G61770.1hmmpanther:PTHR31446hmmpanther:PTHR31446:SF4HOGENOM:HOG000241555
InterPro:IPR003832KEGG:ath:AT3G61770OMA:RIMFASGPfam:PF02681
PhylomeDB:Q8RXV2Proteomes:UP000006548RefSeq:NP_567117.1STRING:3702.AT3G61770.1
TAIR:AT3G61770TMHMM:TMhelixUniGene:At.34231UniProt:Q8RXV2
Coordinates (TAIR10) chr3:+:22864635..22866248
Molecular Weight (calculated) 31090.10 Da
IEP (calculated) 9.58
GRAVY (calculated) 0.31
Length 284 amino acids
Sequence (TAIR10)
(BLAST)
001: MESLTSNPSF ACFSKTISHY PSRFSFVKLT SIQKLEASNN TLSLFCCKSS SNPKPDCNRR IKLNPLCVLR PIIRTIKGLV SSQSRQWMSR FRAYRDDTAA
101: FSEDFAGDLK HNGGLGIALL SVTASAKIKI SPFVATLSAN PTFVSAVVAW FFAQSSKMVI NFFIERKWDF RLLYASGGMP SSHSALCMAL TTSVALCHGV
201: ADSLFPVCLG FSLIVMYDAI GVRRHAGMQA EVLNLIIRDL FEGHPISQRK LKELLGHTPS QVLAGALVGI VIACFCCQGY LVSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)