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AT3G58610.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27177187 (2016): nucleus
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23851315 (2013): plastid
  • PMID:22923678 (2012): plastid
  • PMID:21841088 (2011): mitochondrion
  • PMID:21539947 (2011): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:21433285 (2011): plasma membrane
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18433418 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16207701 (2006): plastid
  • PMID:15028209 (2004): plastid
  • PMID:14671022 (2004): mitochondrion
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ketol-acid reductoisomerase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ketol-acid reductoisomerase; FUNCTIONS IN: copper ion binding, ketol-acid reductoisomerase activity; INVOLVED IN: response to cadmium ion, branched chain family amino acid biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040); Has 7931 Blast hits to 7576 proteins in 2285 species: Archae - 226; Bacteria - 4872; Metazoa - 2; Fungi - 269; Plants - 111; Viruses - 0; Other Eukaryotes - 2451 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G58610-MONOMERBioCyc:ARA:GQT-1289-MONOMERBioCyc:ARA:GQT-1290-MONOMERBioGrid:10345EC:1.1.1.86eggNOG:COG0059eggNOG:ENOG410IEEV
EMBL:AF324671EMBL:AF329500EMBL:AL137082EMBL:AY062094EMBL:AY065398EMBL:AY096556EMBL:BT000669
EMBL:BT000822EMBL:CP002686EMBL:X68150EMBL:X69880EnsemblPlants:AT3G58610EnsemblPlants:AT3G58610.1EnsemblPlants:AT3G58610.2
EnsemblPlants:AT3G58610.3entrez:825030Gene3D:1.10.1040.10Gene3D:3.40.50.720GeneID:825030Genevisible:Q05758GO:GO:0004455
GO:GO:0005507GO:GO:0005618GO:GO:0005739GO:GO:0009097GO:GO:0009099GO:GO:0009507GO:GO:0009536
GO:GO:0009570GO:GO:0009941GO:GO:0046686GO:GO:0048046Gramene:AT3G58610.1Gramene:AT3G58610.2Gramene:AT3G58610.3
gramene_pathway:1.1.1.86gramene_pathway:ILEUSYN-PWYgramene_pathway:VALSYN-PWYgramene_plant_reactome:1119460gramene_plant_reactome:1119600gramene_plant_reactome:6875798gramene_plant_reactome:6876111
hmmpanther:PTHR21371hmmpanther:PTHR21371:SF11HOGENOM:HOG000238129InParanoid:Q05758InterPro:IPR000506InterPro:IPR008927InterPro:IPR013023
InterPro:IPR013116InterPro:IPR013328InterPro:IPR016040InterPro:IPR016206KEGG:00290+1.1.1.86KEGG:00770+1.1.1.86KEGG:ath:AT3G58610
KO:K00053OMA:GKKQFIEPANTHER:PTHR21371PaxDb:Q05758Pfam:PF01450Pfam:PF07991Pfam:Q05758
PhylomeDB:Q05758PIR:S30145PIR:T45681PIRSF:PIRSF000118PRIDE:Q05758PRO:PR:Q05758ProteinModelPortal:Q05758
Proteomes:UP000006548RefSeq:NP_001078309.1RefSeq:NP_001190127.1RefSeq:NP_191420.1SMR:Q05758STRING:3702.AT3G58610.1SUPFAM:SSF48179
SUPFAM:SSF51735TAIR:AT3G58610UniGene:At.46637UniGene:At.480UniGene:At.69012UniPathway:UPA00047UniPathway:UPA00049
UniProt:Q05758
Coordinates (TAIR10) chr3:+:21671561..21674639
Molecular Weight (calculated) 63816.00 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.07
Length 591 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAATSSIAP SLSCPSPSSS SKTLWSSKAR TLALPNIGFL SSSSKSLRSL TATVAGNGAT GSSLAARMVS SSAVKAPVSL DFETSVFKKE KVSLAGYEEY
101: IVRGGRDLFK HLPDAFKGIK QIGVIGWGSQ GPAQAQNLRD SLVEAKSDIV VKIGLRKGSR SFEEARAAGF TEESGTLGDI WETIAGSDLV LLLISDAAQA
201: DNYEKIFSHM KPNSILGLSH GFLLGHLQSS GLDFPKNISV VAVCPKGMGP SVRRLYVQGK EINGAGINAS FAVHQDVDGR AADVALGWSV ALGSPFTFAT
301: TLEQEYRSDI FGERGILLGA VHGIVESLFR RYTENGMSED LAYKNTVECI TGTISRTIST QGMLAVYNSL SEEGKKDFET AYSASFYPCM EILYECYEDV
401: QSGSEIRSVV LAGRRFYEKE GLPAFPMGNI DQTRMWKVGE RVRKSRPAGD LGPLYPFTAG VYVALMMAQI EILRKKGHSY SEIINESVIE SVDSLNPFMH
501: ARGVSFMVDN CSTTARLGSR KWAPRFDYIL TQQALVAVDS GAAINRDLIS NFFSDPVHGA IEVCAQLRPT VDISVPADAD FVRPELRQSS N
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)