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AT3G57610.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : adenylosuccinate synthase
Curator
Summary (TAIR10)
encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate)
Computational
Description (TAIR10)
adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G57610-MONOMERBioCyc:MetaCyc:AT3G57610-MONOMERBRENDA:6.3.4.4EC:6.3.4.4eggNOG:COG0104eggNOG:KOG1355EMBL:AL049660
EMBL:AY054606EMBL:AY081461EMBL:CP002686EMBL:U49389EnsemblPlants:AT3G57610EnsemblPlants:AT3G57610.1entrez:824930
EvolutionaryTrace:Q96529GeneID:824930Genevisible:Q96529GO:GO:0004019GO:GO:0005525GO:GO:0009507GO:GO:0009536
GO:GO:0009570GO:GO:0044208GO:GO:0046040GO:GO:0046686GO:GO:0046872GO:GO:0048046Gramene:AT3G57610.1
HAMAP:MF_00011hmmpanther:PTHR11846hmmpanther:PTHR11846:SF4HOGENOM:HOG000260959InParanoid:Q96529InterPro:IPR001114InterPro:IPR018220
InterPro:IPR027417InterPro:IPR033128iPTMnet:Q96529KEGG:00230+6.3.4.4KEGG:00250+6.3.4.4KEGG:ath:AT3G57610KO:K01939
OMA:FHHAKPIPANTHER:PTHR11846PaxDb:Q96529PDB:1DJ2PDBsum:1DJ2Pfam:PF00709Pfam:Q96529
PhylomeDB:Q96529PIR:T06759PRIDE:Q96529PRO:PR:Q96529PROSITE:PS00513PROSITE:PS01266ProteinModelPortal:Q96529
Proteomes:UP000006548Reactome:R-ATH-73817RefSeq:NP_191320.1scanprosite:PS00513scanprosite:PS01266SMART:SM00788SMR:Q96529
STRING:3702.AT3G57610.1SUPFAM:SSF52540TAIR:AT3G57610tair10-symbols:ADSSTIGRfam:TIGR00184TIGRFAMs:TIGR00184UniGene:At.22505
UniPathway:UPA00075UniProt:Q96529
Coordinates (TAIR10) chr3:-:21334519..21336603
Molecular Weight (calculated) 52967.40 Da
IEP (calculated) 7.15
GRAVY (calculated) -0.11
Length 490 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLSSLTLDS NPRFAVGGPY HRRYPPLHHP RSFVSCSAKR PAVSASLSVA ADSAATESLG RIGSLSQVSG VLGCQWGDEG KGKLVDILAQ HFDIVARCQG
101: GANAGHTIYN SEGKKFALHL VPSGILNEDT TCVIGNGVVV HLPGLFKEID GLESNGVSCK GRILVSDRAH LLFDFHQEVD GLRESELAKS FIGTTKRGIG
201: PAYSSKVIRN GIRVGDLRHM DTLPQKLDLL LSDAAARFQG FKYTPEMLRE EVEAYKRYAD RLEPYITDTV HFINDSISQK KKVLVEGGQA TMLDIDFGTY
301: PFVTSSSPSA GGICTGLGIA PSVVGDLIGV VKAYTTRVGS GPFPTENLGT GGDLLRLAGQ EFGTTTGRPR RCGWLDIVAL KFSCQINGFA SLNLTKLDVL
401: SDLNEIQLGV AYKRSDGTPV KSFPGDLRLL EELHVEYEVL PGWKSDISSV RNYSDLPKAA QQYVERIEEL VGVPIHYIGI GPGRDALIYK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)