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AT3G54110.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Predictors External Curations
AmiGO : mitochondrion 14671022
AmiGO : mitochondrion 17148605
TAIR : plastid 15028209
TAIR : mitochondrion 14671022
TAIR : mitochondrion 17148605
TAIR : plasma membrane 17151019
TAIR : mitochondrion 15276431
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25641898 (2015): plasma membrane
  • PMID:24727099 (2014): mitochondrion
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23444301 (2013): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:22574745 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21472856 (2011): mitochondrion
  • PMID:21311031 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): unclear
  • PMID:15276431 (2004): mitochondrion
  • PMID:15028209 (2004): plastid
  • PMID:14671022 (2004): mitochondrion
  • PMID:12586869 (2003): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : plant uncoupling mitochondrial protein 1
Curator
Summary (TAIR10)
Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate.
Computational
Description (TAIR10)
plant uncoupling mitochondrial protein 1 (PUMP1); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, photosynthesis, photorespiration; LOCATED IN: mitochondrion, mitochondrial inner membrane, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 26567 Blast hits to 13376 proteins in 459 species: Archae - 0; Bacteria - 2; Metazoa - 11203; Fungi - 7876; Plants - 4909; Viruses - 3; Other Eukaryotes - 2574 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XRV1eggNOG:KOG0753EMBL:AF146226EMBL:AJ001264
EMBL:AJ223983EMBL:AK221112EMBL:AL132957EMBL:AY056272
EMBL:AY091185EMBL:CP002686EMBL:Y18291EnsemblPlants:AT3G54110
EnsemblPlants:AT3G54110.1entrez:824578Gene3D:1.50.40.10GeneID:824578
Genevisible:O81845GO:GO:0003735GO:GO:0005739GO:GO:0005743
GO:GO:0005774GO:GO:0006412GO:GO:0006839GO:GO:0009506
GO:GO:0009507GO:GO:0009853GO:GO:0015992GO:GO:0016021
GO:GO:0017077Gramene:AT3G54110.1hmmpanther:PTHR24089hmmpanther:PTHR24089:SF268
HOGENOM:HOG000165140InParanoid:O81845InterPro:IPR002030InterPro:IPR018108
InterPro:IPR023395KEGG:ath:AT3G54110KO:K15103ncoils:Coil
OMA:LLKAHLMPaxDb:O81845Pfam:O81845Pfam:PF00153
Pfscan:PS50920PhylomeDB:O81845PIR:T47570PIR:T52024
PRIDE:O81845PRINTS:PR00784PRO:PR:O81845PROSITE:PS50920
ProteinModelPortal:O81845Proteomes:UP000006548Reactome:R-ATH-167826Reactome:R-ATH-167827
RefSeq:NP_190979.1SMR:O81845STRING:3702.AT3G54110.1SUPFAM:0048588
SUPFAM:SSF103506TAIR:AT3G54110tair10-symbols:ATPUMP1tair10-symbols:ATUCP1
tair10-symbols:PUMP1tair10-symbols:UCPtair10-symbols:UCP1TCDB:2.A.29.3.3
UniGene:At.25009UniGene:At.68442UniProt:O81845
Coordinates (TAIR10) chr3:+:20038890..20040996
Molecular Weight (calculated) 32664.20 Da
IEP (calculated) 10.10
GRAVY (calculated) 0.18
Length 306 amino acids
Sequence (TAIR10)
(BLAST)
001: MVAAGKSDLS LPKTFACSAF AACVGEVCTI PLDTAKVRLQ LQKSALAGDV TLPKYRGLLG TVGTIAREEG LRSLWKGVVP GLHRQCLFGG LRIGMYEPVK
101: NLYVGKDFVG DVPLSKKILA GLTTGALGIM VANPTDLVKV RLQAEGKLAA GAPRRYSGAL NAYSTIVRQE GVRALWTGLG PNVARNAIIN AAELASYDQV
201: KETILKIPGF TDNVVTHILS GLGAGFFAVC IGSPVDVVKS RMMGDSGAYK GTIDCFVKTL KSDGPMAFYK GFIPNFGRLG SWNVIMFLTL EQAKKYVREL
301: DASKRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)