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AT3G53800.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.941
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Fes1B
Curator
Summary (TAIR10)
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150).
Computational
Description (TAIR10)
Fes1B (Fes1B); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide exchange factor Fes1 (InterPro:IPR013918), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1A (TAIR:AT3G09350.1); Has 659 Blast hits to 654 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 199; Plants - 185; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Protein Annotations
DNASU:824547eggNOG:ENOG410Y90BeggNOG:KOG2160EMBL:AL132960EMBL:AY087709EMBL:CP002686EnsemblPlants:AT3G53800
EnsemblPlants:AT3G53800.1entrez:824547Gene3D:1.25.10.10GeneID:824547Gramene:AT3G53800.1hmmpanther:PTHR19316hmmpanther:PTHR19316:SF17
HOGENOM:HOG000239951InterPro:IPR000225InterPro:IPR011989InterPro:IPR013918InterPro:IPR016024KEGG:ath:AT3G53800KO:K09562
OMA:HYLLQESPfam:PF08609PhylomeDB:Q9M346PIR:T45920Proteomes:UP000006548RefSeq:NP_190948.1SMART:SM00185
SMR:Q9M346STRING:3702.AT3G53800.1SUPFAM:SSF48371TAIR:AT3G53800tair10-symbols:Fes1BUniGene:At.1396UniProt:Q9M346
Coordinates (TAIR10) chr3:+:19930942..19932719
Molecular Weight (calculated) 40856.70 Da
IEP (calculated) 4.84
GRAVY (calculated) -0.32
Length 363 amino acids
Sequence (TAIR10)
(BLAST)
001: MANNGPNWDG LLKWSLSHSD GASSSSRISE EDRQWFVEAM QAHTIDSISR MKVISQIMKM PEQVLEAQGV TPDDLEGMLA ELQEHVESID LANDLHSIGG
101: LVPLLSYLKN SNAKIRAKSA DVLTTVVQNN PRSQQLVMEA NGFEPLLTNF IADPDIRVRT KALGAISSLI RNNQPGITAF RLANGYAGLR DALVSDTVRF
201: QRKALNLLHY LLQESNSDCK IVRDLGFPRI MIHLASNQDF EVREFALRGL LELAREESVR NLDRGDVNLR QLLEERTRRI IVMSDEDLCA AREERQLVDS
301: LWTVCYDEPS LLRERGLVYL PSDDELAPDV VRDRFEPPLR AWAARRHDET SESPVPLLLG PAP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)