AT3G49650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT1G18550.1); Has 11521 Blast hits to 10970 proteins in 399 species: Archae - 16; Bacteria - 121; Metazoa - 4988; Fungi - 1461; Plants - 1855; Viruses - 76; Other Eukaryotes - 3004 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:18405260..18409402 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 91056.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.68 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.68 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 813 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPSIRAPAAK KTTTLTVAVK CRPLMEKERG RDIVRVNNSK EVVVLDPDLS KDYLDRIQNR TKEKKYCFDH AFGPESTNKN VYRSMSSVIS SVVHGLNATV 101: FAYGSTGSGK TYTMVGTRSD PGLMVLSLNT IFDMIKSDKS SDEFEVTCSY LEVYNEVIYD LLEKSSGHLE LREDPEQGIV VAGLRSIKVH SADRILELLN 201: LGNSRRKTES TEMNGTSSRS HAVLEIAVKR RQKNQNQVMR GKLALVDLAG SERAAETNNG GQKLRDGANI NRSLLALANC INALGKQHKK GLAYVPYRNS 301: KLTRILKDGL SGNSQTVMVA TISPADSQYH HTVNTLKYAD RAKEIKTHIQ KNIGTIDTHM SDYQRMIDNL QSEVSQLKTQ LAEKESQLSI KPFERGVERE 401: LSWLDGLSHQ ISENVQDRIN LQKALFELEE TNLRNRTELQ HLDDAIAKQA TEKDVVEALS SRRQVILDNI RDNDEAGVNY QRDIEENEKH RCELQDMLNE 501: AINNNGNKTY LHILNQYKLL GMGNTELQFE MAMRDQIIYN QREAQRNLWN LLMGLGVEEK QVFDLAAKQG ITIEDWSSIA LFPGLPYRKQ TPSFIPANIP 601: FVGHSYSKSS CTFQSYQDPS SKGQQWAPTP TLCREEHHSS YYFMRQEPPA FVNLRKSHDG WVGGSRPASR IDTGGNHRRV SYPQTVNNSS PRMASGPTFY 701: QTPQREMLLN TTSPYSSPRV GLINGATTPS VQPFYGSPRA VTVRNGSYNT PLAPAAVSTK GARNQQRVFG TSPLSGTKGV KNSSYGQNSH TKLYRGGGTK 801: GHSKGNNTQR QHQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)