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AT3G47060.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FTSH protease 7
Curator
Summary (TAIR10)
encodes an FtsH protease that is localized to the chloroplast
Computational
Description (TAIR10)
FTSH protease 7 (ftsh7); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 9 (TAIR:AT5G58870.1); Has 41243 Blast hits to 38738 proteins in 3322 species: Archae - 1531; Bacteria - 17472; Metazoa - 4873; Fungi - 3612; Plants - 3353; Viruses - 32; Other Eukaryotes - 10370 (source: NCBI BLink).
Protein Annotations
BRENDA:3.4.24.B20EC:3.4.24.-eggNOG:COG0465eggNOG:KOG0731EMBL:AL133292EMBL:AY099737EMBL:BT000368
EMBL:CP002686EnsemblPlants:AT3G47060EnsemblPlants:AT3G47060.1entrez:823859Gene3D:3.40.50.300GeneID:823859Genevisible:Q9SD67
GO:GO:0004176GO:GO:0004222GO:GO:0005524GO:GO:0005739GO:GO:0006508GO:GO:0008237GO:GO:0008270
GO:GO:0009507GO:GO:0009535GO:GO:0009941GO:GO:0016021Gramene:AT3G47060.1HAMAP:MF_01458hmmpanther:PTHR23076
hmmpanther:PTHR23076:SF70HOGENOM:HOG000217276InParanoid:Q9SD67InterPro:IPR000642InterPro:IPR003593InterPro:IPR003959InterPro:IPR003960
InterPro:IPR005936InterPro:IPR011546InterPro:IPR027417KEGG:ath:AT3G47060KO:K03798MEROPS:M41.A04ncoils:Coil
OMA:RIHGFATPaxDb:Q9SD67Pfam:PF00004Pfam:PF01434Pfam:PF06480Pfam:Q9SD67PhylomeDB:Q9SD67
PIR:T45642PRIDE:Q9SD67PRO:PR:Q9SD67PROSITE:PS00674ProteinModelPortal:Q9SD67Proteomes:UP000006548RefSeq:NP_566889.1
scanprosite:PS00674SMART:SM00382SMR:Q9SD67STRING:3702.AT3G47060.1SUPFAM:SSF140990SUPFAM:SSF52540TAIR:AT3G47060
tair10-symbols:ftsh7TIGRfam:TIGR01241TIGRFAMs:TIGR01241UniGene:At.43767UniProt:Q9SD67
Coordinates (TAIR10) chr3:+:17332999..17336613
Molecular Weight (calculated) 87807.00 Da
IEP (calculated) 8.40
GRAVY (calculated) -0.26
Length 802 amino acids
Sequence (TAIR10)
(BLAST)
001: MTTTFEFLQP RIHGFATCCS SNSLLYSKAS RFFNDRCRVY RQNPNRFVSN SITLPLQKKQ VTVLRNHERF NLWDGFSRKK SRLVVNCQED DQNESSSEEE
101: ESSQSTPAKS ERKREKKEDK VWWSKGKKWQ WQPIIQAQGI GVLLLQLSVV MFVMRLLRPG IPLPGSEPRI QTTFVSVPYS EFLSKVNSNQ VQKVEVDGVQ
201: VLFKLRDDGK WQESETSRLS QSSESLLRTV APTKRVVYST TRPGDIKTPY EKMLGNNVEF GSPEKRSGGF FNSALIALFY IAVLAGLIRF PVSFSTSSTG
301: QLRTRKAGGP DGGKVSGGGE TITFADVAGV DEAKEELEEI VEFLRNPEKY VRLGARPPRG VLLVGLPGTG KTLLAKAVAG EAEVPFISCS ASEFVELYVG
401: MGASRVRDLF ARAKKEAPSI IFIDEIDAVA KSRDGKFRMG SNDEREQTLN QLLTEMDGFD SNSAVIVLGA TNRADVLDPA LRRPGRFDRV VTVETPDKIG
501: RESILRVHVS KKELPLGDDV NLGSIASMTT GFTGADLANL VNEAALLAGR KNKTNVEKID FIQAVERSIA GIEKKSARLK GNEKAVVARH EAGHAVVGTA
601: VANLLTGQPR VEKLSILPRT GGALGFTYIP PTSEDRYLLF IDELLGRLVT LLGGRAAEEV VYSGRISTGA FDDIRRATDM AYKAVAEYGL NQKIGPVSVA
701: TLSGGGIDDS GGSPWGRDQG KLVDLVQKEV TILLQSALDV ALSVVRANPD VLEGLGAQLE EKEKVEGEEL QKWLSMVVAP EELAVFVEGK QELLLPAQAS
801: SS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)