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AT3G32180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.798
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G32160.1); Has 37 Blast hits to 25 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G32180EnsemblPlants:AT3G32180.1entrez:822985GeneID:822985Gramene:AT3G32180.1hmmpanther:PTHR31420
hmmpanther:PTHR31420:SF14InterPro:IPR021704KEGG:ath:AT3G32180PaxDb:F4JA80Pfam:PF11690PhylomeDB:F4JA80PRIDE:F4JA80
Proteomes:UP000006548RefSeq:NP_189760.1TAIR:AT3G32180UniGene:At.65204UniProt:F4JA80
Coordinates (TAIR10) chr3:-:13162413..13162782
Molecular Weight (calculated) 11092.00 Da
IEP (calculated) 4.61
GRAVY (calculated) -0.68
Length 100 amino acids
Sequence (TAIR10)
(BLAST)
1: MENEGASTVC PLDPGSPLFL SGDGFEPVGV LFPHAVFHFP SKEKKEAYDF MDKVVDKHRR LCDERQRLGL KNESEVDVKN EGSTSNPEPA VKEPVPEPLP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)