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AT2G36880.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28611809 (2017): cytosol
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21531424 (2011): plastid
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:14505352 (2003): nucleus
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : methionine adenosyltransferase 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: copper ion binding, methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 10904 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5503; Metazoa - 373; Fungi - 167; Plants - 705; Viruses - 1; Other Eukaryotes - 4143 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G36880-MONOMERBioCyc:ARA:GQT-2657-MONOMERBioGrid:3604EC:2.5.1.6
eggNOG:COG0192eggNOG:KOG1506EMBL:AC006922EMBL:AF367310
EMBL:AY133601EMBL:CP002685EnsemblPlants:AT2G36880EnsemblPlants:AT2G36880.1
EnsemblPlants:AT2G36880.2entrez:818260GeneID:818260Genevisible:Q9SJL8
GO:GO:0004478GO:GO:0005507GO:GO:0005524GO:GO:0005829
GO:GO:0005886GO:GO:0006556GO:GO:0006730GO:GO:0009506
GO:GO:0009809Gramene:AT2G36880.1Gramene:AT2G36880.2gramene_pathway:2.5.1.6
gramene_pathway:ETHYL-PWYgramene_pathway:PWY-4361-ARAgramene_pathway:PWY-5041gramene_pathway:SAM-PWY
HAMAP:MF_00086hmmpanther:PTHR11964hmmpanther:PTHR11964:SF15HOGENOM:HOG000245710
InParanoid:Q9SJL8InterPro:IPR002133InterPro:IPR022628InterPro:IPR022629
InterPro:IPR022630InterPro:IPR022631InterPro:IPR022636KEGG:00270+2.5.1.6
KEGG:ath:AT2G36880KO:K00789MINT:MINT-8064409OMA:CETQIAY
PANTHER:PTHR11964PaxDb:Q9SJL8Pfam:PF00438Pfam:PF02772
Pfam:PF02773Pfam:Q9SJL8PhylomeDB:Q9SJL8PIR:G84785
PIRSF:PIRSF000497PRIDE:Q9SJL8PRO:PR:Q9SJL8PROSITE:PS00376
PROSITE:PS00377ProteinModelPortal:Q9SJL8Proteomes:UP000006548Reactome:R-ATH-156581
Reactome:R-ATH-1614635Reactome:R-ATH-2408508RefSeq:NP_001118458.1RefSeq:NP_181225.1
scanprosite:PS00376scanprosite:PS00377SMR:Q9SJL8STRING:3702.AT2G36880.1
SUPFAM:SSF55973TAIR:AT2G36880tair10-symbols:MAT3TIGRfam:TIGR01034
TIGRFAMs:TIGR01034UniGene:At.23534UniPathway:UPA00315UniProt:Q9SJL8
Coordinates (TAIR10) chr2:-:15479721..15480893
Molecular Weight (calculated) 42499.80 Da
IEP (calculated) 6.09
GRAVY (calculated) -0.24
Length 390 amino acids
Sequence (TAIR10)
(BLAST)
001: METFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTA AKVDYEKIVR STCREIGFIS ADVGLDADKC NVLVNIEQQS
101: PDIAQGVHGH LTKKPEDIGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNKT CPWLRPDGKT QVTVEYKNDG GAMIPIRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP AKYLDDNTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVAAGLAR
301: RCIVQVSYAI GVPEPLSVFV DTYKTGTIPD KDILVLIKEA FDFRPGMMAI NLDLKRGGNF RFQKTAAYGH FGRDDPDFTW EVVKPLKPKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)