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AT2G33210.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22923678 (2012): mitochondrion
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:21433285 (2011): plasma membrane
  • PMID:21296373 (2011): mitochondrion
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:17137349 (2006): mitochondrion
  • PMID:15276431 (2004): mitochondrion
  • PMID:15215502 (2004): plant-type vacuole
  • PMID:15028209 (2004): plastid
  • PMID:14671022 (2004): mitochondrion
  • PMID:11743115 (2001): mitochondrion
FP Images

Arabidopsis cell culture (mitochondrial marker)

At2g33210-GFP
(full-length)
mitochondrial marker-RFPoverlay

Arabidopsis cell culture (plastidal marker)

At2g33210-GFP
(full-length)
plastidal marker-RFPoverlay

SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : heat shock protein 60-2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
heat shock protein 60-2 (HSP60-2); FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: inflammatory response, response to salt stress; LOCATED IN: mitochondrion, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60 (TAIR:AT3G23990.1); Has 33915 Blast hits to 33873 proteins in 8692 species: Archae - 707; Bacteria - 21782; Metazoa - 1680; Fungi - 1548; Plants - 807; Viruses - 2; Other Eukaryotes - 7389 (source: NCBI BLink).
Protein Annotations
BioGrid:3230eggNOG:COG0459eggNOG:KOG0356EMBL:AC002334EMBL:AK175415EMBL:AY136360EMBL:BT000103
EMBL:CP002685EnsemblPlants:AT2G33210EnsemblPlants:AT2G33210.1entrez:817883ExpressionAtlas:Q8L7B5Gene3D:1.10.560.10Gene3D:3.50.7.10
GeneID:817883Genevisible:Q8L7B5GO:GO:0005507GO:GO:0005524GO:GO:0005739GO:GO:0005774GO:GO:0005886
GO:GO:0009507GO:GO:0009570GO:GO:0009735GO:GO:0009941GO:GO:0042026HAMAP:MF_00600hmmpanther:PTHR11353
hmmpanther:PTHR11353:SF80HOGENOM:HOG000076290InParanoid:Q8L7B5IntAct:Q8L7B5InterPro:IPR001844InterPro:IPR002423InterPro:IPR018370
InterPro:IPR027409InterPro:IPR027413iPTMnet:Q8L7B5OMA:NAHKHIAPaxDb:Q8L7B5Pfam:PF00118Pfam:Q8L7B5
PhylomeDB:Q8L7B5PIR:F84742PRIDE:Q8L7B5PRINTS:PR00298PRO:PR:Q8L7B5PROSITE:PS00296ProteinModelPortal:Q8L7B5
Proteomes:UP000006548RefSeq:NP_850203.1scanprosite:PS00296SMR:Q8L7B5STRING:3702.AT2G33210.1SUPFAM:SSF48592SUPFAM:SSF52029
SUPFAM:SSF54849TAIR:AT2G33210tair10-symbols:HSP60-2TIGRfam:TIGR02348TIGRFAMs:TIGR02348UniGene:At.27615UniProt:Q8L7B5
Coordinates (TAIR10) chr2:-:14075093..14078568
Molecular Weight (calculated) 61982.20 Da
IEP (calculated) 6.59
GRAVY (calculated) -0.04
Length 585 amino acids
Sequence (TAIR10)
(BLAST)
001: MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKVCAVKAP GFGENRKANL HDLAALTGAQ VITEELGMNL DNIDLSMFGN CKKVTVSKDD TVVLDGAGDK QAIGERCEQI RSMVEASTSD YDKEKLQERL
401: AKLSGGVAVL KIGGASETEV SEKKDRVTDA LNATKAAVEE GIVPGGGVAL LYASKELEKL STANFDQKIG VQIIQNALKT PVYTIASNAG VEGAVVVGKL
501: LEQDNPDLGY DAAKGEYVDM IKAGIIDPLK VIRTALVDAA SVSSLLTTTE AVVTEIPTKE VASPGMGGGG MGGMGGMGGM GGMGF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)