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AT2G31060.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : elongation factor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1217eggNOG:ENOG410INHTEMBL:BT033032EMBL:CP002685
EnsemblPlants:AT2G31060EnsemblPlants:AT2G31060.1entrez:817658ExpressionAtlas:B3LF44
Gene3D:3.30.70.240Gene3D:3.40.50.300GeneID:817658GO:GO:0003746
GO:GO:0003924GO:GO:0005525Gramene:AT2G31060.1hmmpanther:PTHR23115
hmmpanther:PTHR23115:SF14HOGENOM:HOG000282351InterPro:IPR000640InterPro:IPR000795
InterPro:IPR004161InterPro:IPR006298InterPro:IPR009000InterPro:IPR009022
InterPro:IPR027417PANTHER:PTHR23115:SF14Pfam:PF00009Pfam:PF00679
Pfam:PF03144Pfscan:PS51722PhylomeDB:B3LF44PROSITE:PS51722
Proteomes:UP000006548RefSeq:NP_180664.2SMR:B3LF44STRING:3702.AT2G31060.3
SUPFAM:SSF50447SUPFAM:SSF52540SUPFAM:SSF54980TAIR:AT2G31060
UniGene:At.38268UniProt:B3LF44
Coordinates (TAIR10) chr2:-:13213496..13217686
Molecular Weight (calculated) 57355.40 Da
IEP (calculated) 5.97
GRAVY (calculated) -0.18
Length 527 amino acids
Sequence (TAIR10)
(BLAST)
001: MVEGAILVVD AGEGPLAQTK FVLAKALKYG LRPILLLNKV DRPSVTEERC DEVESLVFDL FANCGATEEQ LDFPVLYASA KEGWASSTYT KDPPVDAKNM
101: ADLLDAVVRH VQPPKANLDE PFLMLVSMME KDFYLGRILT GRVTSGVVRV GDRVNGLRKT DSGSEKIEEA KVVKLMKKKG TTIVSIDAAG AGDIICMAGL
201: TAPSIGHTVA SAEVTTALPT VELDPPTISM TFGVNDSPLA GQDGTHLTGG RIGDRLMAEA ETNLAINVIP GLSESYEVQG RGELQLGILI ENMRREGFEL
301: SVSPPKVMYK TEKGQKLEPI EEVTIEINDE HVGLVMEALS HRRAEVIDMG PVPGNEGRTR LSLTCPSRGL VGYRCVFSSD TRGTGFMHRA FLTYEKYRGP
401: LGNVRKGVLV SMARGTITAH SLMSLEARGI LFVSPGLDSY DGMIIGEHSR ETDLDLNPVK AKELTNIRSA GKDENVKLSP PRLMTLEEAI GYVASDELIE
501: VTPKTIRLRK RCLDVNKRKS QSKRAKD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)