suba logo
AT2G31040.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ATP synthase protein I -related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IQDJeggNOG:ENOG4111K5BEMBL:AC004669EMBL:AC005311
EMBL:AY050461EMBL:AY090339EMBL:CP002685EnsemblPlants:AT2G31040
EnsemblPlants:AT2G31040.1entrez:817656GeneID:817656GO:GO:0009534
GO:GO:0033614Gramene:AT2G31040.1hmmpanther:PTHR34118hmmpanther:PTHR34118:SF3
HOGENOM:HOG000243524IntAct:O82279KEGG:ath:AT2G31040KO:K02116
OMA:WDRAAKAPhylomeDB:O82279PIR:G84715Proteomes:UP000006548
RefSeq:NP_565711.1STRING:3702.AT2G31040.1TAIR:AT2G31040UniGene:At.12965
UniGene:At.66349UniProt:O82279
Coordinates (TAIR10) chr2:-:13209094..13211012
Molecular Weight (calculated) 38612.50 Da
IEP (calculated) 9.84
GRAVY (calculated) -0.35
Length 350 amino acids
Sequence (TAIR10)
(BLAST)
001: MAILSYISAT STTPPIPQDQ SPNSRLPTKI ILPNKKPEKW STGVAPGEYG GPPTTTKLRK YWGGEKEDPI TSTDLIWNRD FMDQMKKLFD DPNDSSLDPS
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)