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AT2G30170.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G30170-MONOMERBioCyc:ARA:GQT-463-MONOMERBioGrid:2918EC:3.1.3.16eggNOG:COG0631eggNOG:KOG1379EMBL:AC004165
EMBL:AF370298EMBL:AY063046EMBL:CP002685EnsemblPlants:AT2G30170EnsemblPlants:AT2G30170.1entrez:817569Gene3D:3.60.40.10
GeneID:817569Genevisible:O64730GO:GO:0004721GO:GO:0009507GO:GO:0009570GO:GO:0010027GO:GO:0035970
GO:GO:0046872GO:GO:0071482hmmpanther:PTHR12320hmmpanther:PTHR12320:SF7HOGENOM:HOG000237527InParanoid:O64730IntAct:O64730
InterPro:IPR001932KEGG:ath:AT2G30170MINT:MINT-8390765OMA:CGLRVIRPaxDb:O64730Pfam:O64730Pfscan:PS51746
PhylomeDB:O64730PIR:T00581PRIDE:O64730PRO:PR:O64730PROSITE:PS51746ProteinModelPortal:O64730Proteomes:UP000006548
RefSeq:NP_001077980.1RefSeq:NP_565696.1SMART:SM00331SMART:SM00332STRING:3702.AT2G30170.1SUPFAM:SSF81606TAIR:AT2G30170
UniGene:At.19566UniProt:O64730
Coordinates (TAIR10) chr2:-:12879802..12881474
Molecular Weight (calculated) 32286.60 Da
IEP (calculated) 4.94
GRAVY (calculated) -0.01
Length 298 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIPVTRMMV PHAIPSLRLS HPNPSRVDFL CRCAPSEIQP LRPELSLSVG IHAIPHPDKV EKGGEDAFFV SSYRGGVMAV ADGVSGWAEQ DVDPSLFSKE
101: LMANASRLVD DQEVRYDPGF LIDKAHTATT SRGSATIILA MLEEVGILKI GNVGDCGLKL LREGQIIFAT APQEHYFDCP YQLSSEGSAQ TYLDASFSIV
201: EVQKGDVIVM GSDGLFDNVF DHEIVSIVTK HTDVAESSRL LAEVASSHSR DTEFESPYAL EARAKGFDVP LWKKVLGKKL TGGKLDDVTV IVAKVVSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)