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AT2G29310.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.743
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29320.1); Has 114765 Blast hits to 114570 proteins in 3512 species: Archae - 969; Bacteria - 75949; Metazoa - 4618; Fungi - 5616; Plants - 2449; Viruses - 5; Other Eukaryotes - 25159 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G29310-MONOMERBioCyc:ARA:GQT-1943-MONOMEREC:1.1.1.-eggNOG:COG1028eggNOG:KOG0725EMBL:AC004561EMBL:AK175221
EMBL:BT010425EMBL:CP002685EnsemblPlants:AT2G29310EnsemblPlants:AT2G29310.1entrez:817480ExpressionAtlas:Q9ZW14Gene3D:3.40.50.720
GeneID:817480Genevisible:Q9ZW14GO:GO:0016491hmmpanther:PTHR24322hmmpanther:PTHR24322:SF623IntAct:Q9ZW14InterPro:IPR002347
InterPro:IPR016040OMA:EDVGFKEPANTHER:PTHR24322PaxDb:Q9ZW14Pfam:PF00106Pfam:Q9ZW14PhylomeDB:Q9ZW14
PIR:G84694PRIDE:Q9ZW14PRINTS:PR00080PRINTS:PR00081PRO:PR:Q9ZW14ProteinModelPortal:Q9ZW14Proteomes:UP000006548
RefSeq:NP_180492.1SMR:Q9ZW14STRING:3702.AT2G29310.1SUPFAM:SSF51735TAIR:AT2G29310UniGene:At.38493UniProt:Q9ZW14
Coordinates (TAIR10) chr2:+:12590068..12591260
Molecular Weight (calculated) 28090.60 Da
IEP (calculated) 6.11
GRAVY (calculated) 0.18
Length 262 amino acids
Sequence (TAIR10)
(BLAST)
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA SFGAIIHICD ISETLLSQSL SEWEKKGFQV SGSICDVASR PDREKLMQTV SSLFDGKLNI LVNNVGVIRG
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)