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AT2G28900.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:32219438 (2020): cytosol
  • PMID:31932409 (2020): plastid
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30865669 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:24872594 (2014): plastid plastid envelope
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:23390424 (2013): plastid plastid envelope
  • PMID:22923678 (2012): plastid
  • PMID:22550958 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21311031 (2011): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid plastid envelope
  • PMID:15539469 (2004): plant-type vacuole
  • PMID:15028209 (2004): plastid
  • PMID:12938931 (2003): plastid
  • PMID:12766230 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : outer plastid envelope protein 16-1
Curator
Summary (TAIR10)
Encodes AtOEP16, a 16-KDa plastid outer membrane protein involved in plastid import of protochlorophyllide oxidoreductase A. Predominantly expressed in leaves and is also inducible by cold treatment.
Computational
Description (TAIR10)
outer plastid envelope protein 16-1 (OEP16-1); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, plastid outer membrane, vacuole, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT4G16160.1); Has 150 Blast hits to 150 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:2789DNASU:817439eggNOG:ENOG410IX6CeggNOG:ENOG410YKVU
EMBL:AC005727EMBL:AY045593EMBL:AY084261EMBL:AY093782
EMBL:CP002685EMBL:DQ386642EnsemblPlants:AT2G28900EnsemblPlants:AT2G28900.1
entrez:817439GeneID:817439Genevisible:Q9ZV24GO:GO:0003333
GO:GO:0005744GO:GO:0005773GO:GO:0009409GO:GO:0009507
GO:GO:0009527GO:GO:0009536GO:GO:0009611GO:GO:0009707
GO:GO:0009744GO:GO:0009749GO:GO:0009753GO:GO:0009941
GO:GO:0015171GO:GO:0015266GO:GO:0015288GO:GO:0030150
GO:GO:0031305GO:GO:0034426GO:GO:0042803GO:GO:0045037
GO:GO:0046930Gramene:AT2G28900.1hmmpanther:PTHR15371hmmpanther:PTHR15371:SF2
HOGENOM:HOG000239997InParanoid:Q9ZV24IntAct:Q9ZV24InterPro:IPR003397
KEGG:ath:AT2G28900OMA:WKNAMLAPaxDb:Q9ZV24Pfam:PF02466
Pfam:Q9ZV24PhylomeDB:Q9ZV24PIR:C84690PRIDE:Q9ZV24
PRO:PR:Q9ZV24Proteomes:UP000006548RefSeq:NP_180456.1STRING:3702.AT2G28900.1
TAIR:AT2G28900tair10-symbols:ATOEP16-1tair10-symbols:ATOEP16-Ltair10-symbols:OEP16
tair10-symbols:OEP16-1UniGene:At.25376UniProt:Q9ZV24
Coordinates (TAIR10) chr2:-:12414423..12415459
Molecular Weight (calculated) 15482.60 Da
IEP (calculated) 9.59
GRAVY (calculated) 0.12
Length 148 amino acids
Sequence (TAIR10)
(BLAST)
001: MPSSTFSGTV STPKLSVAVD MGNPFLNLTV DAFLKIGAVG VTKSLAEDTY KAIDKGSLSK STLEHALKKL CKEGVYWGAA GGVYIGTEYG IERIRGSRDW
101: KNAMLAGAAT GAVLSAVGKK GKDTIVIDAI LGGALATASQ FVNNHYFY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)