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AT2G26150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : heat shock transcription factor A2
Curator
Summary (TAIR10)
member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.
Computational
Description (TAIR10)
heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A6B (TAIR:AT3G22830.1); Has 2162 Blast hits to 2147 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 326; Fungi - 474; Plants - 849; Viruses - 0; Other Eukaryotes - 513 (source: NCBI BLink).
Protein Annotations
BioGrid:2507eggNOG:COG5169eggNOG:KOG0627EMBL:AC004747EMBL:AK118744EMBL:CP002685EnsemblPlants:AT2G26150
EnsemblPlants:AT2G26150.1entrez:817155ExpressionAtlas:O80982Gene3D:1.10.10.10GeneID:817155Genevisible:O80982GO:GO:0001666
GO:GO:0003700GO:GO:0005634GO:GO:0005737GO:GO:0006351GO:GO:0009408GO:GO:0009644GO:GO:0010200
GO:GO:0010286GO:GO:0034605GO:GO:0034620GO:GO:0042542GO:GO:0043565GO:GO:0044212GO:GO:0045893
GO:GO:0071456hmmpanther:PTHR10015hmmpanther:PTHR10015:SF186HOGENOM:HOG000237979InParanoid:O80982IntAct:O80982InterPro:IPR000232
InterPro:IPR011991InterPro:IPR027725iPTMnet:O80982MINT:MINT-8152620OMA:MMTFLAKPANTHER:PTHR10015PaxDb:O80982
Pfam:O80982Pfam:PF00447PhylomeDB:O80982PIR:T02609PRIDE:O80982PRINTS:PR00056PRO:PR:O80982
PROSITE:PS00434ProteinModelPortal:O80982Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371511Reactome:R-ATH-3371568Reactome:R-ATH-3371571
RefSeq:NP_180184.1scanprosite:PS00434SMART:SM00415SMR:O80982STRING:3702.AT2G26150.1SUPFAM:SSF46785TAIR:AT2G26150
tair10-symbols:ATHSFA2tair10-symbols:HSFA2UniGene:At.38933UniProt:O80982
Coordinates (TAIR10) chr2:+:11135856..11137217
Molecular Weight (calculated) 39116.40 Da
IEP (calculated) 4.90
GRAVY (calculated) -0.58
Length 345 amino acids
Sequence (TAIR10)
(BLAST)
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)