AT2G22250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : aspartate aminotransferase | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity. | ||||||||||||||||||||||||
| Computational Description (TAIR10) |
aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 49853 Blast hits to 49849 proteins in 3081 species: Archae - 1094; Bacteria - 34200; Metazoa - 783; Fungi - 895; Plants - 1391; Viruses - 0; Other Eukaryotes - 11490 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:9458011..9460028 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 46041.50 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.53 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.08 | ||||||||||||||||||||||||
| Length | 428 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSRICAMAK PNDAETLSSS VDMSLSPRVQ SLKPSKTMVI TDLAATLVQS GVPVIRLAAG EPDFDTPKVV AEAGINAIRE GFTRYTLNAG ITELREAICR 101: KLKEENGLSY APDQILVSNG AKQSLLQAVL AVCSPGDEVI IPAPYWVSYT EQARLADATP VVIPTKISNN FLLDPKDLES KLTEKSRLLI LCSPSNPTGS 201: VYPKSLLEEI ARIIAKHPRL LVLSDEIYEH IIYAPATHTS FASLPDMYER TLTVNGFSKA FAMTGWRLGY LAGPKHIVAA CSKLQGQVSS GASSIAQKAG 301: VAALGLGKAG GETVAEMVKA YRERRDFLVK SLGDIKGVKI SEPQGAFYLF IDFSAYYGSE AEGFGLINDS SSLALYFLDK FQVAMVPGDA FGDDSCIRIS 401: YATSLDVLQA AVEKIRKALE PLRATVSV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)