AT2G21380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Kinesin motor family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Kinesin motor family protein; FUNCTIONS IN: microtubule motor activity, zinc ion binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Zinc finger, RING-type (InterPro:IPR001841), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Kinesin motor family protein (TAIR:AT4G39050.1); Has 67269 Blast hits to 46072 proteins in 2386 species: Archae - 574; Bacteria - 7992; Metazoa - 30280; Fungi - 6003; Plants - 5457; Viruses - 386; Other Eukaryotes - 16577 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:9141833..9148883 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 117096.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.15 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.55 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1058 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MASSSSRTRS RSPFSHRRPP SPYSSASSTS SSLINNRLLP RSSSTPTSTV YNSGGVTGSR SMSITRTISD SGPIGGSGTY GAQSYPSEGL IGESGQTITS 0101: ERDSISVTVR FRPMSEREYQ RGDEIVWYPD ADKMVRNEYN PLTAYAFDKV FGPQSTTPEV YDVAAKPVVK AAMEGVNGTV FAYGVTSSGK THTMHGDQDF 0201: PGIIPLAIKD VFSIIQETTG REFLLRVSYL EIYNEVINDL LDPTGQNLRI REDSQGTYVE GIKEEVVLSP GHALSFIAAG EEHRHVGSNN FNLMSSRSHT 0301: IFTLMIESSA HGDQYDGVIF SQLNLIDLAG SESSKTETTG LRRKEGAYIN KSLLTLGTVI GKLTEGKTTH VPFRDSKLTR LLQSSLSGHG HVSLICTVTP 0401: ASSSTEETHN TLKFASRAKR IEINASRNKI IDEKSLIKKY QKEISTLKVE LDQLRRGVLV GVSHEELLSL KQQLQEGQVK MQSRLEEEEE AKAALMSRIQ 0501: KLTKLILVST KNSIPGYLGD TPAHSRSISA GKDDKLDSLL LDSDNLASPS STLSLASDAR RSSSKFKDEN SPVGSRAELT QGVMTPDEMD LLVEQVKMLA 0601: GEIAFGTSTL KRLVDQSMND PENSKTQIQN LENDIQEKQR QMKSLEQRIT ESGEASIANA SSIEMQEKVM RLMTQCNEKS FELEIISADN RILQEQLQTK 0701: CTENNELHEK VHLLEQRLSS QKATLSCCDV VTEEYVDELK KKVQSQEIEN EKLKLEHVQS VEEKSGLRVQ NQKLAEEASY AKELASAAAI ELKNLADEVT 0801: KLSLQNAKLE KELVAARDLA AAAQKRNNNS MNSAANRNGT RPGRKARISD SWNLNQENLT MELQARKQRE AVLEAALAEK EYIEEEFRKK AEEAKRREEA 0901: LENDLANMWV LVAKLKKANS GALSIQKSDE AEPAKEDEVT ELDNKNEQNA ILKERQLVNG HEEVIVAKAE ETPKEEPLVA RLKARMQEMK EKEMKSQAAA 1001: AANADANSHI CKVCFESPTA TILLPCRHFC LCKSCSLACS ECPICRTKIS DRLFAFPS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)