AT2G15110.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function, DUF601 | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function, DUF601; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF601 (InterPro:IPR006736); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF601 (TAIR:AT1G46696.1); Has 2365 Blast hits to 2015 proteins in 377 species: Archae - 30; Bacteria - 336; Metazoa - 940; Fungi - 220; Plants - 116; Viruses - 8; Other Eukaryotes - 715 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:6554847..6557168 | ||||||||||||||||||||
| Molecular Weight (calculated) | 65425.50 Da | ||||||||||||||||||||
| IEP (calculated) | 8.19 | ||||||||||||||||||||
| GRAVY (calculated) | -0.76 | ||||||||||||||||||||
| Length | 583 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPPRKVVREV FLIDGKFEKY KTSLSTSSRL LLLRGAHQIP HQIPLISPEP TVCPENPPPG HPSEEDRFSL SLNDLLQLYA VKKGRTKGTF FLSPRKGFRV 101: FDDFPDKDEQ WRKSYFFFPV NDLTYGNKTG LFVSEWAART DLGWESLTID RIRASGRRIR SRTDLAVSSP PFCPRIIDKA DMSLPSSRQT TNKASVSAGK 201: KPETPTSGSG KTIKDPAGKD SEKRAADKKR KQPEETNPSP PRSSRPRHEE KGAKLKGIVK EAPQNLVVLS SRESETCESE RRNVPLPAPP MTFADTMRTL 301: VPPGSAIAPF DEMKEVNKEN YLRFARKLGK LILEFNSVFC SHEDQLFDKD VEIESFKRSE DENAKAVEKA NKVMNRMKAA ELQVQKLEVN NIDLTAKLKA 401: GKNAYLDAIE KETQARADLR TCKEKMKKME EEQAEMIVAA RTDERRKVRA QFHDFSSKYG NFFKESEEVE TLKVRVAEAK ANRELLEEIE KGEIPDLSKE 501: LESVRADEEK FARHAAEPKT PRPDPTELTS LLADTPSEVA AESIPPAEVA IIDEGGSNKG STSEAGIAAM FPVDVEKDSG KTE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)