AT2G01220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.914 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nucleotidylyl transferase superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:123301..126213 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42149.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.70 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||
| Length | 387 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGDAAIRTVV EAIHSSPTQA VVYLCGGASL ALGWLMSVPG ASNTLLESVV PYSRVSMVQL LGRVPSQHCS QALAKEMALL AYNRALKLSK PGYPVLGVGF 101: TGSLVTSRPK RGDHRFFLSM RASDRILESS VTLTKNLRSR EEEDKVSSCA LIQAMAKACQ VSGTLDSGLT ESEVPYESET HFTEEQELEQ LINGHLCCKI 201: YPFSGAHGSD EDRKIILPGS FNPLHEGHLK LLEVAMSVCG GGYPCFEISA INADKPPLTI AQIKDRVKQF EVVGKTIIVS NQPYFYKKAE LFPGSSFVIG 301: ADTAARLVNP KYYEGSIKRM LEILGDCKRT GCTFLVGGRN VDGVFKVLED VDIPEEIIDM FISIPADIFR MDISSTEIRK KQGGGTN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)