AT1G79600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G71810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29950105..29952516 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 79026.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.71 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 711 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLVVGQSLG LTLVGDGLSL RNSKINVGKS KFFSVNRRRL ARAALVQARP KEDGAAASPS PSSRPASVVQ YRRADLADDL QAEARALGRA IDASIYSPEL 101: IARKHGSQPF KALRRSLEIL GALGGFALKL GIDQKQGNLE KNMKKRAIEL RRIFTRLGPT FVKLGQGLST RPDLCPPDYL EELAELQDAL PTFPDAEAFA 201: CIERELDLSL ETIFSSVSPE PIAAASLGQV YKAQLRYSGQ VVAVKVQRPG IEEAIGLDFY LIRGVGKLIN KYVDFITTDV LTLIDEFACR VYQELNYVQE 301: AQNARRFKKL YADKADVLVP DIFWDYTSRK VLTMEWVEGT KLNEQLAIES QGLKVLDLVN TGIQCSLRQL LEYGFFHADP HPGNLLATPD GKLAFLDFGM 401: MSETPEEARF AIIGHVVHLV NRDYEAMARD YYALKFLSPD VDVTPIIPAL RDFFDDALNY TVSELNFKTL VDGLGAVFYQ YPFNVPPYYA LILRSLTVLE 501: GLALYADPNF KVLAASYPYF AKRLLTDPNP YLRDALIELL FKDGKFRWNR LENLLQQGSK DRDFSAKDAL QPVLKLLLDP NGEELRLLVI KEAVRVSEAI 601: ALGTVVDTYN SLPEFLRSLV FNGNGNGPLT MSTAELQSTL ELRDQVSRIW GLLQSSESFD PAILQPILQV LQQPEARRLG GRVAGGVGQR LAARFLQQLL 701: RATTPSSAPS P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)