AT1G71040.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cupredoxin superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes LPR2. Function together with LPR1 (AT1G23010) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Low Phosphate Root2 (LPR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cellular response to phosphate starvation, meristem maintenance; LOCATED IN: cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G23010.1); Has 2992 Blast hits to 2635 proteins in 791 species: Archae - 14; Bacteria - 2507; Metazoa - 11; Fungi - 66; Plants - 272; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:26797201..26800224 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66168.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.56 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 581 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEPSRRRMTR DMLLLIVTMA WLVTGDEGGI KQEERLFNLG KLEMFVDKLP HIPTLHGYHF VNGFLKPKSL HIGMFFKKWK FHRDLPATPV FAYGTSKRSA 101: TVPGPTIEAV YGVDTYVTWR NHLPLHHILP WDPTISPAIP KHGGIPTVVH LHGGIHEPTS DGNADSWFTA GFKETGSKWT KKTTHYVNKQ QPGNMWYHDH 201: AAGLTRVNLL AGLLGSYILR HSSVESPLRL PTGREFDRPL VIFDRSFRKD GSIYMNATGN NPTIHPQWQP EYFGDAIIVN GKAWPRLTVR RRKYRFRITN 301: ASNARFFRFF FSNGLDFIVV GSDSAYLAKP VSTKSVLLAP SEIVDVLVDF SKSTSKTAIL ANNAPYPYPS GDPVTEENSK VMKFIINYKS EVDTSIIPKK 401: LIEYPPAHVS TSTRTRYIAM FEYVSSIDEP THLYINGLPY NAPVTETPKI GTSEVWEVIN LTEDNHPLHI HLGLFKVLEQ TALVKSEEFI ECMTKRNDAV 501: KCEISKYARG NKTAVTVHER GWKNVFKMMP GHVTKILVRF SYIHSNESYS FDATQEPGYV YHCHILDHED NMMMRPFAMV L |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)