AT1G70820.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphoglucomutase, putative / glucose phosphomutase, putative | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
phosphoglucomutase, putative / glucose phosphomutase, putative; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: phosphoglucosamine mutase family protein (TAIR:AT5G17530.2); Has 16953 Blast hits to 16952 proteins in 2734 species: Archae - 435; Bacteria - 11347; Metazoa - 78; Fungi - 46; Plants - 64; Viruses - 0; Other Eukaryotes - 4983 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26705594..26708034 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67316.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.77 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 615 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASTSTSSLM ASKTVISKTA LFSSLPGIVS RSFLTFAPAS PSVKPLRIRS SNVTKFDEVT NSLDEDMDQI RRLQNGSDVR GVALEGEKGR TVDLTPAAVE 101: AIAESFGEWV AATESNGNGV IKISLGRDPR VSGGKLSTAV FAGLARAGCL AFDMGLATTP ACFMSTLLSP FEYDASIMMT ASHLPYTRNG LKFFTKRGGL 201: TSPEVEKICD LAARKYATRQ TKVSTLIRTR PQQVDFMSAY SKHLREIIKE RINHPEHYDT PLKGFQIVVN AGNGSGGFFT WDVLDKLGAD TFGSLYLNPD 301: GMFPNHIPNP ENKIAMQHTR AAVLENSADL GVVFDTDVDR SGVVDNKGNP INGDKLIALM SAIVLKEHPG STVVTDARTS MGLTRFITER GGRHCLYRVG 401: YRNVIDKGVE LNKDGIETHL MMETSGHGAV KENHFLDDGA YMVVKIIIEM VRMRLAGSNE GIGSLIEDLE EPLEAVELRL NILSEPRDAK AKGIEAIETF 501: RQYIEEGKLK GWELGTCGDC WVTEGCLVDS NDHPSAIDAH MYRARVSDEE SGEEYGWVHM RQSIHNPNIA LNMQSMLPGG CLSMTRIFRD QFLEASGVAR 601: FLDISDFDNY IGGQS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)