suba logo
AT1G70570.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : anthranilate phosphoribosyltransferase, putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
anthranilate phosphoribosyltransferase, putative; FUNCTIONS IN: anthranilate phosphoribosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: tryptophan biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1698 Blast hits to 1698 proteins in 721 species: Archae - 76; Bacteria - 1423; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink).
Protein Annotations
EMBL:AF360286EMBL:AY051042EMBL:CP002684EnsemblPlants:AT1G70570EnsemblPlants:AT1G70570.1entrez:843394ExpressionAtlas:Q9C5F4
Gene3D:3.40.1030.10GeneID:843394GO:GO:0016757Gramene:AT1G70570.1hmmpanther:PTHR11922hmmpanther:PTHR11922:SF1HOGENOM:HOG000238760
InterPro:IPR000312InterPro:IPR017459Pfscan:PS51257PhylomeDB:Q9C5F4Proteomes:UP000006548RefSeq:NP_564991.1SUPFAM:SSF47648
SUPFAM:SSF52418TAIR:AT1G70570UniGene:At.18118UniProt:Q9C5F4
Coordinates (TAIR10) chr1:+:26608719..26612062
Molecular Weight (calculated) 65228.20 Da
IEP (calculated) 6.85
GRAVY (calculated) -0.26
Length 595 amino acids
Sequence (TAIR10)
(BLAST)
001: MKALLNPESS FCLSSISSSQ IKRSLHFNGL SSSCLRFPLT DFAGRLRRRK LTGGLCIKAV LDSAMMEQLG LKESDVKNPA LSSTYRGSEI PKPNLTVLDA
101: QARVCTGPTQ TRPLSEEQAF KVFDTILRSA RGELKDEEPV SKAQLGAFFA GMTIRANAFP EETQWSEGEK RAMDVFWPLL VRALPPDVLF IADPEGSLLG
201: TGNSVGPTFV GNETREMRLV GALREILAGG HLGYEEVKGV LRDVLPLETE GSLNSGVSES LLSAFLIGQR MNRETDRELK AYCLAFDDEH GAPPVADVKS
301: LTHYGEPYDG NTRFFRSTLF VAAVRSCCGE SSLLHGVEWM PPKGGVTEEQ MLKFMGANTH LSVQQAKELI EDEKAGFAYL SLREARPSLY SLIEMREHIK
401: KRPPLATTEK VQQFVRATGK EAIVAGFYHE GYEEPLLMLM RRRGVHSGLV VKGEEGALSM TTRVRAASAS KGFPVNYCSG FRSLSSDTAL EADGVSRQSF
501: NLEVDARNYG FEPTETPRTD RSVSKNIELG LAALRGEKGA AYDRIVLNAG IVDHLLGSEG AEDVAVAMER AKEAIDSGKA LKKLLNYIEI SRKIK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)