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AT1G68020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.886
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase / trehalose-phosphatase family protein
Curator
Summary (TAIR10)
Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.
Computational
Description (TAIR10)
ATTPS6; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 3258 Blast hits to 3213 proteins in 972 species: Archae - 43; Bacteria - 1733; Metazoa - 120; Fungi - 641; Plants - 336; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0380eggNOG:COG1877eggNOG:KOG1050EMBL:KJ138949EnsemblPlants:AT1G68020EnsemblPlants:AT1G68020.1entrez:843130
ExpressionAtlas:W8Q789Gene3D:3.40.50.1000GeneID:843130GO:GO:0005992GO:GO:0016740Gramene:AT1G68020.1gramene_pathway:2.4.1.15
gramene_pathway:3.1.3.12gramene_pathway:TRESYN-PWYgramene_plant_reactome:1119516gramene_plant_reactome:6876346hmmpanther:PTHR10788hmmpanther:PTHR10788:SF48InterPro:IPR001830
InterPro:IPR003337InterPro:IPR023214KEGG:ath:AT1G68020KO:K16055PaxDb:W8Q789Pfam:PF00982Pfam:PF02358
RefSeq:NP_564918.1STRING:3702.AT1G68020.2SUPFAM:SSF53756SUPFAM:SSF56784tair10-symbols:ATTPS6tair10-symbols:TPS6UniGene:At.19364
UniProt:W8Q789
Coordinates (TAIR10) chr1:+:25497493..25499595
Molecular Weight (calculated) 80073.80 Da
IEP (calculated) 8.07
GRAVY (calculated) -0.21
Length 700 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSRSYSNLL ELASGDSPTF GRMNRQIPRI MAVAGIMSNI DNDSKDTDLS PKDRIIIVAN ELPIRAQRRV DGNGSGSSSS STCCSKGWNF SWDENSLLLQ
101: LKDGLGDEAI EVIYVGCLKE EIPLNEQEEV YQILLESFKC VPTFLPLDLY TRYYHGFCKQ QLWPLFHYML PLSPDLGGRF DRTLWQAYVS VNKIFADRIM
201: EVINPEDDFV WIHDYHLMVL PTFLRKRFNR VKLGFFLHSP FPSSEIYKTL PIREELLRAL LNSDLIGFHT FDYARHFLSC CSRMLGLTYE SKRGYIGLEY
301: YGRTVSIKIL PVGIHMGQLQ SVLSLPETER KVGELIERYG RKGRTMLLGV DDMDIFKGIT LKLLAMEQLL MQHPEWQGKV VLVQIANPAR GKGKDVKEMQ
401: AETYSTVKRI NETFGRPGYD PIVLIDAPLK FYERVAYYVV AECCLVTAVR DGMNLIPYEY IVSRQGNEKL DKILKLEANN RNKKSMLVVS EFIGCSPSLS
501: GAIRVNPWNV DAVADAMDSA LEVAEPEKQL RHEKHYKYVS THDVGYWARS FLQDLERSCG EHGRRRCWGI GFGLSFRVVA LDQSFRKLSM EHIVSAYKRT
601: KTRAILLDYD DTLMPQGSID KRPSSKSIDI LNTLCRDKGN LVFIVSAKSR ETLSDWFSPC EKLGIAAEHG YFLRYSTKTF YFLALPLYLI TQAPSNYYTG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)