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AT1G66080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF775 (InterPro:IPR008493); Has 285 Blast hits to 283 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 88; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111H6NeggNOG:KOG4067EMBL:AC026480EMBL:AK229482
EMBL:BT010193EMBL:CP002684EnsemblPlants:AT1G66080EnsemblPlants:AT1G66080.1
entrez:842922GeneID:842922GO:GO:0005829Gramene:AT1G66080.1
hmmpanther:PTHR12925hmmpanther:PTHR12925:SF0HOGENOM:HOG000272739InterPro:IPR008493
InterPro:IPR031318KEGG:ath:AT1G66080OMA:DRWFKKFPANTHER:PTHR12925:SF0
Pfam:PF05603PhylomeDB:Q9C8D7PIR:D96685Proteomes:UP000006548
RefSeq:NP_176782.1SMR:Q9C8D7STRING:3702.AT1G66080.1TAIR:AT1G66080
UniGene:At.35804UniProt:Q9C8D7
Coordinates (TAIR10) chr1:-:24600356..24601027
Molecular Weight (calculated) 21098.50 Da
IEP (calculated) 5.25
GRAVY (calculated) 0.18
Length 190 amino acids
Sequence (TAIR10)
(BLAST)
001: MFGVVFPNRS FPIDISTFTQ IDTFHWVLDM NHFVGEAYDQ ISEMCIFLLN NFNLPPDKAL AVYVQSPGSA FVFCGAVTLA RPSAVLSLQW PEPGSAAKMQ
101: LTAGDSSSLS AKIGVSVEDV AALRSLDVVA ERRIEKLAMK VGENLFNFMQ SFCGVDGSKL VVPMDILDRW FKKFQEKAKR DPDFLKSFAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)