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AT1G54820.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G58690.1); Has 106030 Blast hits to 104996 proteins in 3211 species: Archae - 91; Bacteria - 12815; Metazoa - 37555; Fungi - 8802; Plants - 31337; Viruses - 314; Other Eukaryotes - 15116 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002684EnsemblPlants:AT1G54820
EnsemblPlants:AT1G54820.1entrez:841921Gene3D:2.60.120.200GeneID:841921
GO:GO:0004672GO:GO:0005524GO:GO:0016021Gramene:AT1G54820.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF92InParanoid:F4HYK7InterPro:IPR000719
InterPro:IPR001245InterPro:IPR011009InterPro:IPR013320KEGG:ath:AT1G54820
OMA:GCIYAGRPaxDb:F4HYK7Pfam:PF07714Pfscan:PS50011
PRIDE:F4HYK7PROSITE:PS50011ProteinModelPortal:F4HYK7Proteomes:UP000006548
Reactome:R-ATH-450302Reactome:R-ATH-450321RefSeq:NP_175879.2SMR:F4HYK7
STRING:3702.AT1G54820.1SUPFAM:SSF56112TAIR:AT1G54820TMHMM:TMhelix
UniGene:At.49978UniProt:F4HYK7
Coordinates (TAIR10) chr1:+:20447370..20450761
Molecular Weight (calculated) 51877.10 Da
IEP (calculated) 9.33
GRAVY (calculated) -0.41
Length 458 amino acids
Sequence (TAIR10)
(BLAST)
001: MNNTKMENKS HSNHHRYHHL SSRSHEQNQR GLISINAIII IGISIISIFI ILAILLIIIL LHRLKSARVK AQELSCKESF NNMNNGGAST NYSYTSSPDD
101: IKRDCLYSRN PTSFRQLPPQ TKSCRRSRAE GVEVYTYKEL EIATNNFSEE KKIGNGDVYK GVLSDGTVAA IKKLHMFNDN ASNQKHEERS FRLEVDLLSR
201: LQCPYLVELL GYCADQNHRI LIYEFMPNGT VEHHLHDHNF KNLKDRPQPL DWGARLRIAL DCARALEFLH ENTISTVIHR NFKCTNILLD QNNRAKVSDF
301: GLAKTGSDKL NGEISTRVIG TTGYLAPEYA STGKLTTKSD VYSYGIVLLQ LLTGRTPIDS RRPRGQDVLV SWALPRLTNR EKISEMVDPT MKGQYSQKDL
401: IQVAAIAAVC VQPEASYRPL MTDVVHSLIP LVKAFNKSTD SSRFPSRRES LSFDDIMP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)