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AT1G50380.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Prolyl oligopeptidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G69020.1); Has 7641 Blast hits to 7556 proteins in 1214 species: Archae - 80; Bacteria - 3203; Metazoa - 306; Fungi - 27; Plants - 212; Viruses - 0; Other Eukaryotes - 3813 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G50380-MONOMEReggNOG:COG1770eggNOG:ENOG410IU1BEMBL:AC007980EMBL:AY079011EMBL:CP002684EnsemblPlants:AT1G50380
EnsemblPlants:AT1G50380.1entrez:841460ESTHER:arath-F14I3.4Gene3D:3.40.50.1820GeneID:841460GO:GO:0004252GO:GO:0005829
GO:GO:0070008Gramene:AT1G50380.1hmmpanther:PTHR11757hmmpanther:PTHR11757:SF10HOGENOM:HOG000249811InterPro:IPR001375InterPro:IPR002470
InterPro:IPR023302InterPro:IPR029058KEGG:ath:AT1G50380KO:K01354merops:S09.010OMA:SLDPWFSPANTHER:PTHR11757
Pfam:PF00326Pfam:PF02897PhylomeDB:Q9SX53PIR:A96540PRINTS:PR00862Proteomes:UP000006548RefSeq:NP_564567.1
SMR:Q9SX53STRING:3702.AT1G50380.1SUPFAM:SSF50993SUPFAM:SSF53474TAIR:AT1G50380UniGene:At.18963UniProt:Q9SX53
Coordinates (TAIR10) chr1:+:18662480..18666185
Molecular Weight (calculated) 80943.20 Da
IEP (calculated) 5.57
GRAVY (calculated) -0.44
Length 710 amino acids
Sequence (TAIR10)
(BLAST)
001: MAESRSPPVA KKVEHVMEMF GDVRVDNYYW LRDDSRTNPD MLSYLREENH YTDFVMSGTK QFENQLFAEI RGRIKEDDIS APLRKGPYYY YEKNLQGKEY
101: IQHCRRLITD NKAEPSVYDT MPTGPDAPPE HVILDENTKA QEHDYYRIGA FKASPDHKLV AYAEDTKGDE IYTVNVIDSE ALKPVGQQLK GLTSYLEWAG
201: NDALLYITMD EILRPDKVWL HKLGTEQSSD VCLYHEKDDM FSLELHASES HKYLFVASES KTTRFVFSLD VSKTQDGLRV LTPRVDGIDS SVSHRGNHFF
301: IQRRSTEFYN SELIACPVDD TSKTTVLLPH RESVKIQEIQ LFRDHLAVFE RENGLQKITV HRLPAEGQPL EGLQGGRNVS FVDPVYSVDS TESEFSSRVL
401: RFKYCSMKTP PSVYDYDMDS GTSVVKKIDT VLGGFDASNY VTERKWVAAS DGTQIPMSIV YNKKLAKLDG SDPLLLYGYG SYEISVDPYF KASRLSLLDR
501: GFTFVIAHVR GGGEMGRQWY ENGKLLKKKN TFTDFIACAE RLIELKYCSK EKLCMEGRSA GGLLMGAVVN MRPDLFKVVI AGVPFVDVLT TMLDPTIPLT
601: TSEWEEWGDP RKEEFYFYMK SYSPVDNVTA QNYPNMLVTA GLNDPRVMYS EPGKWVAKLR EMKTDNNVLL FKCELGAGHF SKSGRFEKLQ EDAFTFAFMM
701: KVLDMIPASG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)