AT1G35660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.969 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 309 Blast hits to 256 proteins in 99 species: Archae - 0; Bacteria - 11; Metazoa - 192; Fungi - 12; Plants - 36; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:13192743..13197655 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 156425.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.47 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||
| Length | 1405 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEQSAAPQPP TMPLPYLPSS VEASRDDLQC IGTMVIVPPK PVGFLCGSIP VLADNSFPAS FTSALLPSQE TVVTAPRYQM LPMETDLNLP PLLTDFPDNV 0101: LPLAAVKSRI TGDISKEANV ITSNLSKKCE ALAVSGLVEY GDEIDVIAPV DILKQIFKIP YSKARVSIAV QRVGQTLVLN PGPDVEEGEK LIRRHNNQPK 0201: CTKNVDESLF LNFAMHSVRM EACDIPPTHR EHTEKRSSSS ALPAGENSHD NAPDDRLDKP AGSSKQSKQD GFICEKKKSK KNKAGVEPVR KNSQISEKIK 0301: SSGDSEKHSR GGSNEFLRVL FWQFHNFRML LGSDLLLFSN EKYVAVSLHL WDVSEKVTPL TWLEAWLDNV MASVPELAIC YHENGIVQGY ELLKTDDIFI 0401: LKGISEDGTP AFHPHVVQQN GLAVLRFLQS NCKEDPGAYW LYKSAGEDEL QLFDLSIISK NHSSSVHNDS ASSPSLIHSG RSDSMFSLGN LLYRVGHRLS 0501: LSVVPNDRNK CARFLTQCLN CLDAPDHLVV RAYAHEQFAR LILNSDEESD LTFESNGVQR EVKITDLEEE ALDPVTIADH ENETVTFSED KFTEDHSVSN 0601: IVPLVSVRPK LEANVSLCKE LLHSDSPDSH DTEGSAVNSS SDTSLDLGTL CQTTTSPISS KLSAINHVSQ AIKSLRWTRQ LQSSEQVDAF HDILPDFSKC 0701: SCGDPDCIEV CDIRKWLPTS KLDRKLWNLV LLLGESYLSL GEAYKEDKQL HQALNTVELA CSIYGSMPQK FEETLFVSSM NKSLSLQSKF HERTQVEDLE 0801: AKSGPSDISV EELSSTRLFW AKVWMLVGDI YVQFHILKGQ ELSRRTKGTT NHLKMQSEVV KEVQRLKKKL TEYSQNCASC SLVNCSCKSD RASSGSSASS 0901: SNGSSARTVP HSRKHNRKLQ SKNVASKVSR DVEDERVNFK VENKSRKEEE DTSGETKGAV RLEQNESNSK ETPGAKKGGI FKYLKGSKTD DAESNLLAAL 1001: NCYEETRRAL QELPSNCSEF QSVLRKKGWV CNELGRNRLG SKELNKAEDA FADAIVAFKE VCDHTNVILI NCNLGHGRRA LAEEMVPKIE ALELHRAFEN 1101: AYQKALGTAK LEYSKSLRYY MAAKTELSVA TAEASSVSDN LKVEVYTQLA NTYLRFGMLL ANEDTTAAAR EQKNILENTH DSSSDGKSSD LRKREVLSAS 1201: DAIREALALY ESLGEIRKQE AAFAYLQLAR YHKDCCLGFL ETERQGSPRK PESNVIQRAK QYALLADRNW QKSMDFYGPE NLPSMFLTIL IERSALSSTV 1301: SNFWQLNFML ESALSRLLEG RHISKTYAES LRTEDPKLYT KFMAQLQMVL KRMLALSLPS EGANKSQTCG RSGDSGKLRE LYKTSLKSTN LCDLNAMHAL 1401: WTSSP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)