AT1G26160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Metal-dependent phosphohydrolase | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: Metal-dependent phosphohydrolase (TAIR:AT2G23820.2); Has 1552 Blast hits to 1531 proteins in 690 species: Archae - 126; Bacteria - 959; Metazoa - 120; Fungi - 153; Plants - 73; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:9044784..9046945 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28696.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.59 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||
| Length | 258 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVISPATRF APPLNRPFHR RSILASFHSS SRNFLFLGKP TPSSTIVSVR CQKPVSDGVS SMESMNHVAS SVSSSIDFLT LCHRLKTTKR KGWINQGING 101: PESIADHMYR MALMALIAGD LTGVDRERCI KMAIVHDIAE AIVGDITPSD GVPKEEKSRR ETAALKEMCE VLGGGLRAEE ITELWLEYEN NASLEANIVK 201: DFDKVEMILQ ALEYEAEHGK VLDEFFISTA GKFQTEIGKS WAAEINARRK SQLTNRQR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)