AT1G16460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : rhodanese homologue 2 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a cytoplasmic thiosulfate:cyanide sulfurtransferase, activity of which increased the rhodanese activity of transgenic yeast. Can also act as a mercaptopyruvate sulfurtransferase. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
rhodanese homologue 2 (RDH2); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: cytosol, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: mercaptopyruvate sulfurtransferase 1 (TAIR:AT1G79230.1); Has 6167 Blast hits to 6142 proteins in 1437 species: Archae - 162; Bacteria - 3582; Metazoa - 248; Fungi - 148; Plants - 95; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:5619848..5621981 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34719.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.91 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||
| Length | 318 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASSGSEAKA NYAPISTNEP VVSVDWLHSN LGDADIKVLD ASWYMAHEQR NPIQEYQVAH IPGALFFDLN GIADRKTNLR HMLPSEEAFA AGCSALGIEN 101: NDGVVVYDGM GLFSAARVWW MFRVFGHDKV WVLDGGLPKW RASGYDVESS VSNDAILKAS AATEAIEKIY QGQTISPITF QTKFRPHLVL ALDQVKENIE 201: DKTYQHIDAR SKARFDGIAP EPWKGLPSGH IPGSKCVPFP LMFDSSQTLL PAEELKKQFE QEDISLDSPI AASCGTGVTA CILALGLYRL GKTNVAIYDG 301: SWTEWATAPN LPIVGSSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)